RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-201ENST00000401921 LAMB3Q13751 1172 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 TBC1D25Q3MII6 688 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 TNFAIP8L3Q5GJ75 292 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 DPY19L2Q6NUT2 758 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 FASTKD5Q7L8L6 764 aaKnown RBP7.99□□□□□ -1.13
HDAC9-201ENST00000401921 NDUFAF2Q8N183 169 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 ARFGAP1Q8N6T3 406 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 RNF169Q8NCN4 708 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 BEST2Q8NFU1 509 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 RNF157Q96PX1 679 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 OSMRQ99650 979 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 SNRNP25Q9BV90 132 aaKnown RBP7.99□□□□□ -1.13
HDAC9-201ENST00000401921 ASB7Q9H672 318 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 CHKBQ9Y259 395 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 STARD13Q9Y3M8 1113 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 PPP2R3BQ9Y5P8 575 aa7.99□□□□□ -1.13
HDAC9-201ENST00000401921 STK10O94804 968 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SLC26A2P50443 739 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ZNF484Q5JVG2 852 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 RNF43Q68DV7 783 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PMF1Q6P1K2 205 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SLC30A9Q6PML9 568 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 APBB1IPQ7Z5R6 666 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 FAM228AQ86W67 206 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ARID3BQ8IVW6 561 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PDCD7Q8N8D1 485 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 RFWD2Q8NHY2 731 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 DTX3LQ8TDB6 740 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 RNF34Q969K3 372 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ALKBH8Q96BT7 664 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 MRPL45Q9BRJ2 306 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 DNAI2Q9GZS0 605 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 LRRC4Q9HBW1 653 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ADARB2Q9NS39 739 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ARMCX1Q9P291 453 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PIN4Q9Y237 131 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CCDC78A2IDD5 438 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SNRPAP09012 282 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 MYL2P10916 166 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CCDC130P13994 396 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 AMPD1P23109 780 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CCND1P24385 295 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CYP2F1P24903 491 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SERPINB3P29508 390 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ATICP31939 592 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 KDSRQ06136 332 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 MGAT5Q09328 741 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 GRM1Q13255 1194 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SLC5A9Q2M3M2 681 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 MUM1Q2TAK8 710 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 DCAF6Q58WW2 860 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 C1QTNF12Q5T7M4 302 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 DENND5BQ6ZUT9 1274 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ILDR2Q71H61 639 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 IGDCC3Q8IVU1 814 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 NAT8LQ8N9F0 302 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 DNAAF3Q8N9W5 541 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 OR6J1Q8NGC5 347 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 B4GALNT2Q8NHY0 566 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 NDRG1Q92597 394 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PEBP4Q96S96 227 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 TRIM56Q9BRZ2 755 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 MECRQ9BV79 373 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PDZD7Q9H5P4 517 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 FBXO6Q9NRD1 293 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PCNTO95613 3336 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PRPF4O43172 522 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 HCRTO43612 131 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ENO1P06733 434 aaKnown RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 YY1P25490 414 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ADORA2AP29274 412 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CA9Q16790 459 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 C6orf163Q5TEZ5 329 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CDCA2Q69YH5 1023 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ZCCHC23Q6ZST2 131 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PID1Q7Z2X4 250 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 SLC26A11Q86WA9 606 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 AGGF1Q8N302 714 aaeCLIP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 NIPA2Q8N8Q9 360 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 C18orf25Q96B23 403 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 CDCA5Q96FF9 252 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 TBC1D10AQ9BXI6 508 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 GCOM2Q9BZD3 368 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PPP1R12CQ9BZL4 782 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 PPCSQ9HAB8 311 aa7.98□□□□□ -1.13
HDAC9-201ENST00000401921 ARHGAP42A6NI28 874 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PPEF2O14830 753 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 HUS1O60921 280 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 BAG2O95816 211 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PDHA1P08559 390 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GCAP28676 217 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GNL1P36915 607 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-201ENST00000401921 NOMO1Q15155 1222 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 CHI3L2Q15782 390 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 GRIK4Q16099 956 aa7.97□□□□□ -1.13
HDAC9-201ENST00000401921 PPP1R15BQ5SWA1 713 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms