RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
SCFD2-202ENST00000401642 CLDN5O00501 218 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 COPEO14579 308 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 TYROBPO43914 113 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 USP12O75317 370 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 UNC5CO95185 931 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCFD2-202ENST00000401642 VDRP11473 427 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 SLC8A1P32418 973 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 ELF1P32519 619 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 PREPLQ4J6C6 727 aaPredicted RBP11.53□□□□□ -0.56
SCFD2-202ENST00000401642 PLPPR4Q7Z2D5 763 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 PCGF5Q86SE9 256 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 ANKRD13AQ8IZ07 590 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 PPP1R14CQ8TAE6 165 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 AGR3Q8TD06 166 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 DCAKDQ8WVC6 231 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 RNF157Q96PX1 679 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 LGMNQ99538 433 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 ACSS3Q9H6R3 686 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 TTLL3Q9Y4R7 772 aa11.53□□□□□ -0.56
SCFD2-202ENST00000401642 TIMM13Q9Y5L4 95 aaPredicted RBP11.53□□□□□ -0.56
SCFD2-202ENST00000401642 LAMA3Q16787 3333 aa11.52□□□□□ -0.56
SCFD2-202ENST00000401642 CFAP73A6NFT4 308 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 A6NJR5 290 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 C2CD4BA6NLJ0 364 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 IL18RAPO95256 599 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 METTL18O95568 372 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 PROZP22891 400 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 PITX1P78337 314 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 TMPRSS15P98073 1019 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 IFRD2Q12894 506 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 KLHL38Q2WGJ6 581 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 GALNTL6Q49A17 601 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 TP53INP2Q8IXH6 220 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 UTP4Q969X6 686 aaKnown RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 IGKV6-21A0A0C4DH24 114 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 A0A0G2JLL6 359 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 PAPSS1O43252 624 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 SAT1P21673 171 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 OSBPP22059 807 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 CYP2F1P24903 491 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 ARHGAP1Q07960 439 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 AP1B1Q10567 949 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 ANKRD20A3Q5VUR7 823 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 RFWD3Q6PCD5 774 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 DRICH1Q6PGQ1 229 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 CEP128Q6ZU80 1094 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 POLNQ7Z5Q5 900 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 PRRT2Q7Z6L0 340 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 MAP7D3Q8IWC1 876 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 GBP7Q8N8V2 638 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 SLC10A4Q96EP9 437 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 TBC1D10AQ9BXI6 508 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 BCO2Q9BYV7 579 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 LHX5Q9H2C1 402 aa11.52□□□□□ -0.57
SCFD2-202ENST00000401642 ZMYND8Q9ULU4 1186 aaPredicted RBP11.52□□□□□ -0.57
SCFD2-202ENST00000401642 TSPAN1O60635 241 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ARFIP2P53365 341 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 GRIK4Q16099 956 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 EML3Q32P44 896 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NOL9Q5SY16 702 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PPP1R2P3Q6NXS1 205 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 RIBC1Q8N443 379 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 CCDC185Q8N715 623 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NIPA2Q8N8Q9 360 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 RILPQ96NA2 401 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PCDH18Q9HCL0 1135 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 TXLNGQ9NUQ3 528 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SLC24A2Q9UI40 661 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PIN4Q9Y237 131 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SLC25A27O95847 323 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PFKMP08237 780 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 MYL2P10916 166 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 GOT1P17174 413 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 CDH5P33151 784 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PEX19P40855 299 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 KDSRQ06136 332 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 TFDP2Q14188 446 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 DCAF6Q58WW2 860 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 APBB1IPQ7Z5R6 666 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ARID3BQ8IVW6 561 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PQLC3Q8N755 202 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SLC2A14Q8TDB8 520 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 DEPDC1BQ8WUY9 529 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 USP6NLQ92738 828 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 MCRS1Q96EZ8 462 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NUDCD1Q96RS6 583 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 APOL2Q9BQE5 337 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 TMEM120AQ9BXJ8 343 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ARL8BQ9NVJ2 186 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NME7Q9Y5B8 376 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms