RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 HHLA1C9JL84 531 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 POMCP01189 267 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 ODC1P11926 461 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 NOS2P35228 1153 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 RPL22P35268 128 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 APLP1P51693 650 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 YWHAZP63104 245 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 NPNTQ6UXI9 565 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 P3H4Q92791 437 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 MED10Q9BTT4 135 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 KRT82Q9NSB4 513 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 TMEM30AQ9NV96 361 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 DSEQ9UL01 958 aa12.78□□□□□ -0.36
CLIP4-203ENST00000401617 NOVA2Q9UNW9 492 aaKnown RBP12.78□□□□□ -0.36
CLIP4-203ENST00000401617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.77□□□□□ -0.36
CLIP4-203ENST00000401617 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 AP1G2O75843 785 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 B3GAT3O94766 335 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 IFNB1P01574 187 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 ABHD2P08910 425 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 NDUFV1P49821 464 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 PRMT2P55345 433 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 MAP3K7CLP57077 242 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 KYNUQ16719 465 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 LRRC31Q6UY01 552 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 RSAD2Q8WXG1 361 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 LINC01599Q8WXQ3 324 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 RSPH1Q8WYR4 309 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 NDRG1Q92597 394 aaKnown RBP12.77□□□□□ -0.36
CLIP4-203ENST00000401617 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.36
CLIP4-203ENST00000401617 SUSD3Q96L08 255 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.36
CLIP4-203ENST00000401617 NRDE2Q9H7Z3 1164 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 USP29Q9HBJ7 922 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 PHF24Q9UPV7 400 aa12.77□□□□□ -0.36
CLIP4-203ENST00000401617 SMAPO00193 183 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 APOL1O14791 398 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 RASGRF2O14827 1237 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 ALOX15BO15296 676 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 FYNP06241 537 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 MAGEA4P43358 317 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 ATP1A2P50993 1020 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 TKTL1P51854 596 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 DAOAP59103 153 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 MAGOHP61326 146 aaKnown RBP12.77□□□□□ -0.37
CLIP4-203ENST00000401617 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 ROR1Q01973 937 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 CBLBQ13191 982 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 AUHQ13825 339 aaKnown RBP12.77□□□□□ -0.37
CLIP4-203ENST00000401617 SLC24A5Q71RS6 500 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 PPIL6Q8IXY8 311 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 NAT8LQ8N9F0 302 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 CPT1BQ92523 772 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 SMARCD1Q96GM5 515 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 SERPINB12Q96P63 405 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 PRDM16Q9HAZ2 1276 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 DNAJC17Q9NVM6 304 aaKnown RBP12.77□□□□□ -0.37
CLIP4-203ENST00000401617 FZD10Q9ULW2 581 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 AP4E1Q9UPM8 1137 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 USP3Q9Y6I4 520 aa12.77□□□□□ -0.37
CLIP4-203ENST00000401617 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 SRRM3A6NNA2 597 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 ARVCFO00192 962 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 NRP1O14786 923 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 ACSL3O95573 720 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 AGTP01019 485 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 TYMPP19971 482 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 CYP2F1P24903 491 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 MDH1P40925 334 aaKnown RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 BRCC3P46736 316 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 CDK7P50613 346 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 CACNA2D1P54289 1103 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 BCAR1P56945 870 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 GNGT1P63211 74 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 DSC1Q08554 894 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 METTL23Q86XA0 190 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 SIX6OS1Q8N1H7 587 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 SCML4Q8N228 414 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 CCDC185Q8N715 623 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 FAM71DQ8N9W8 422 aa12.76□□□□□ -0.37
CLIP4-203ENST00000401617 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 EPS8L3Q8TE67 593 aaKnown RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
CLIP4-203ENST00000401617 POPDC2Q9HBU9 364 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms