RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 C1orf228Q6PIY5 440 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 TMEM139Q8IV31 216 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 KIAA1524Q8TCG1 905 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 SLC35F5Q8WV83 523 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 BAP1Q92560 729 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 SECISBP2LQ93073 1101 aaKnown RBP18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 NACA2Q9H009 215 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 CCSER2Q9H7U1 834 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 TBC1D17Q9HA65 648 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 ACP6Q9NPH0 428 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 GKN1Q9NS71 199 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 SMPD4Q9NXE4 827 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 CPQQ9Y646 472 aa18.37■□□□□ 0.53
SMIM11A-202ENST00000399295 A0A1W2PQH9 124 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 LEFTY2O00292 366 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 FOXN3O00409 490 aaPredicted RBP18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 EPHB6O15197 1021 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 CCP110O43303 1012 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 THAP12O43422 761 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 MED7O43513 233 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 TLR5O60602 858 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 OBSL1O75147 1896 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 TCF3P15923 654 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 AVPR2P30518 371 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 PSEN1P49768 467 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 ZXDBP98169 803 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 RAPGEF1Q13905 1077 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 MTF1Q14872 753 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 ASTLQ6HA08 431 aaPredicted RBP18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 TPRG1Q6ZUI0 275 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 NUP210Q8TEM1 1887 aaPredicted RBP18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 ZNF606Q8WXB4 792 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 KCTD13Q8WZ19 329 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 NELL2Q99435 816 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 FAM83CQ9BQN1 747 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 NMUR1Q9HB89 426 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 OSER1Q9NX31 292 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 NAGPAQ9UK23 515 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 PYCARDQ9ULZ3 195 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 FHOD1Q9Y613 1164 aa18.36■□□□□ 0.53
SMIM11A-202ENST00000399295 MYH10P35580 1976 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ZBED1O96006 694 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 RARGP13631 454 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 GLULP15104 373 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 KPNA1P52294 538 aaPredicted RBP18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 PTK2Q05397 1052 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ADIGQ0VDE8 80 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 USP4Q13107 963 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 DRAP1Q14919 205 aaPredicted RBP18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 CWF19L1Q69YN2 538 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 PM20D1Q6GTS8 502 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 SCD5Q86SK9 330 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 SIX6OS1Q8N1H7 587 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ARHGAP18Q8N392 663 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 MSANTD3Q96H12 275 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 SPAG5Q96R06 1193 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 DDX23Q9BUQ8 820 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 OSBPL6Q9BZF3 934 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ULBP1Q9BZM6 244 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 KCND1Q9NSA2 647 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 GTSE1Q9NYZ3 720 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 CLIC5Q9NZA1 410 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 PIAS3Q9Y6X2 628 aa18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-202ENST00000399295 ANAPC1Q9H1A4 1944 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 KANSL1LA0AUZ9 987 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 LRRC53A6NM62 1247 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 ZNF500O60304 480 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 TBX18O95935 607 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 PNMA6AP0CW24 399 aaPredicted RBP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 RALAP11233 206 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 LCP1P13796 627 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 AOC1P19801 751 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 CD72P21854 359 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 RGS7P49802 495 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 VCPP55072 806 aaKnown RBP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 TNK2Q07912 1038 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 PDGFRLQ15198 375 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 SFMBT2Q5VUG0 894 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 TRIM68Q6AZZ1 485 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 DENND1BQ6P3S1 775 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 ZNF852Q6ZMS4 543 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 DDX42Q86XP3 938 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 FAM71AQ8IYT1 594 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 TTC8Q8TAM2 541 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 OSCP1Q8WVF1 389 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 HSFY1Q96LI6 401 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 STK33Q9BYT3 514 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 EBF3Q9H4W6 596 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 NLRC4Q9NPP4 1024 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 DUS2Q9NX74 493 aaKnown RBP18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 CFAP97Q9P2B7 532 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 WNT6Q9Y6F9 365 aa18.34■□□□□ 0.53
SMIM11A-202ENST00000399295 PATJQ8NI35 1801 aa18.33■□□□□ 0.53
SMIM11A-202ENST00000399295 F5P12259 2224 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms