RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 KCTD10Q9H3F6 313 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.76□□□□□ -0.53
SRMP1-201ENST00000398959 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
SRMP1-201ENST00000398959 LSM7Q9UK45 103 aaKnown RBP11.76□□□□□ -0.53
SRMP1-201ENST00000398959 A0A1B0GVL5 298 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 NEDD8-MDP1E9PL57 170 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 IKBKBO14920 756 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 KIF20AO95235 890 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 ASS1P00966 412 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 HLA-DRAP01903 254 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 MYL1P05976 194 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 HOXB2P14652 356 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 PFKFB1P16118 471 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 ATP5C1P36542 298 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 ASPAP45381 313 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 IRX4P78413 519 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 LMAN2Q12907 356 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 PKP1Q13835 747 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 SH3PXD2AQ5TCZ1 1133 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 GRAMD4Q6IC98 578 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 SV2AQ7L0J3 742 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 CRYBG2Q8N1P7 616 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 FRMD1Q8N878 549 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 KCNV2Q8TDN2 545 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 TMEM174Q8WUU8 243 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 WBP2Q969T9 261 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 CCDC47Q96A33 483 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 XPO6Q96QU8 1125 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 DUSP9Q99956 384 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 NUSAP1Q9BXS6 441 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 CSNK1G1Q9HCP0 422 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 DNAJC17Q9NVM6 304 aaKnown RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 USP25Q9UHP3 1055 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
SRMP1-201ENST00000398959 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 PCDH15Q96QU1 1955 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 CKAP5Q14008 2032 aa11.75□□□□□ -0.53
SRMP1-201ENST00000398959 FRYQ5TBA9 3013 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 GIPC1O14908 333 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 ZBTB24O43167 697 aaPredicted RBP11.74□□□□□ -0.53
SRMP1-201ENST00000398959 CYP26A1O43174 497 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 AP5Z1O43299 807 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 TBX18O95935 607 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 ACO1P21399 889 aaKnown RBP11.74□□□□□ -0.53
SRMP1-201ENST00000398959 NTSR1P30989 418 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 DPP6P42658 865 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 PTGER3P43115 390 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 PGFP49763 221 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 VAMP7P51809 220 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 ZNF252P-AS1Q0IIN9 211 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 SPDYCQ5MJ68 293 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 LYSMD4Q5XG99 296 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 SDE2Q6IQ49 451 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 TPGS1Q6ZTW0 290 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 CLEC20AQ6ZU45 233 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 HTR3DQ70Z44 454 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 GPRIN1Q7Z2K8 1008 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 SYT12Q8IV01 421 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 CCDC150Q8NCX0 1101 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 CYFIP2Q96F07 1278 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
SRMP1-201ENST00000398959 DNAI2Q9GZS0 605 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 MMRN2Q9H8L6 949 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 EVLQ9UI08 416 aaPredicted RBP11.74□□□□□ -0.53
SRMP1-201ENST00000398959 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
SRMP1-201ENST00000398959 ATXN2Q99700 1313 aaKnown RBP11.74□□□□□ -0.53
SRMP1-201ENST00000398959 A0A1W2PQH9 124 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 CDX4O14627 284 aaPredicted RBP11.73□□□□□ -0.53
SRMP1-201ENST00000398959 TRIM24O15164 1050 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 MAPK13O15264 365 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 KRT13P13646 458 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 CEACAM1P13688 526 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 TYRP14679 529 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 GABRG2P18507 467 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 CD58P19256 250 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 CMA1P23946 247 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 NR2F2P24468 414 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 WASP42768 502 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 MAPK8P45983 427 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 GCLMP48507 274 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
SRMP1-201ENST00000398959 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 FOXC1Q12948 553 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 SLC36A4Q6YBV0 504 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 TWNKQ96RR1 684 aa11.73□□□□□ -0.53
SRMP1-201ENST00000398959 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
SRMP1-201ENST00000398959 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms