RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 IL1BP01584 269 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 SDC4P31431 198 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 CCDC6Q16204 474 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 GOLGA7BQ2TAP0 167 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 C9orf131Q5VYM1 1079 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 RFWD3Q6PCD5 774 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 LCLAT1Q6UWP7 414 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 COPS5Q92905 334 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 RTP4Q96DX8 246 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 OXNAD1Q96HP4 312 aaPredicted RBP13.61□□□□□ -0.23
PRAME-201ENST00000398741 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 FAM167BQ9BTA0 163 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 TRIM6Q9C030 488 aaPredicted RBP13.61□□□□□ -0.23
PRAME-201ENST00000398741 POPDC2Q9HBU9 364 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 LRRC42Q9Y546 428 aa13.61□□□□□ -0.23
PRAME-201ENST00000398741 POLR2AP24928 1970 aaKnown RBP13.61□□□□□ -0.23
PRAME-201ENST00000398741 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 GSC2O15499 205 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 KRT38O76015 456 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 MAP3K6O95382 1288 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 RBP5P82980 135 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 TMPRSS15P98073 1019 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 KRT72Q14CN4 511 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CCDC14Q49A88 953 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 TEX9Q8N6V9 391 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CXorf38Q8TB03 319 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 FAM172AQ8WUF8 416 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 APBB2Q92870 758 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PDZD7Q9H5P4 517 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PCDH18Q9HCL0 1135 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 STOML1Q9UBI4 398 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 A0A087WZ62 844 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 FAM237BA0A1B0GVD1 139 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 C2orf71A6NGG8 1288 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 FCHO1O14526 889 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 TXNP10599 105 aaKnown RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 CYP3A5P20815 502 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PAX7P23759 505 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 INCA1Q0VD86 236 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 STILQ15468 1287 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 GPR162Q16538 588 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 SLC10A6Q3KNW5 377 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CDHR3Q6ZTQ4 885 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 LMNTD2Q8IXW0 634 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PQLC3Q8N755 202 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 ARMC2Q8NEN0 867 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 TEKT4Q8WW24 435 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 PRR11Q96HE9 360 aaPredicted RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 TBCBQ99426 244 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 FDXACB1Q9BRP7 624 aaPredicted RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 SLC13A1Q9BZW2 595 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
PRAME-201ENST00000398741 PLLPQ9Y342 182 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CSADQ9Y600 493 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 MAD1L1Q9Y6D9 718 aa13.6□□□□□ -0.23
PRAME-201ENST00000398741 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 DPYSL4O14531 572 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 C22orf31O95567 290 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 SLC25A27O95847 323 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 APOEP02649 317 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 IL4RP24394 825 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 PRKCHP24723 683 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 SESN3P58005 492 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 BLMHQ13867 455 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 KCTD2Q14681 263 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 KYAT1Q16773 422 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 FAM187BQ17R55 369 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 MUM1Q2TAK8 710 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 PPP6R3Q5H9R7 873 aaPredicted RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 SLC9A4Q6AI14 798 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 RINLQ6ZS11 566 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 APBB1IPQ7Z5R6 666 aaPredicted RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 CAND1Q86VP6 1230 aaKnown RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 ARHGAP24Q8N264 748 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 C12orf29Q8N999 325 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 PCDH19Q8TAB3 1148 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 CCDC110Q8TBZ0 833 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 E2F7Q96AV8 911 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 LRRC39Q96DD0 335 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 MECRQ9BV79 373 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 SNRNP25Q9BV90 132 aaKnown RBP13.59□□□□□ -0.23
PRAME-201ENST00000398741 DPP3Q9NY33 737 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRAME-201ENST00000398741 C1QAP02745 245 aa13.59□□□□□ -0.23
PRAME-201ENST00000398741 GSTA2P09210 222 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms