RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ZNF212Q9UDV6 495 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 IGF2BP3O00425 579 aaKnown RBP eCLIP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PDHA1P08559 390 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 TNFRSF8P28908 595 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 ELK3P41970 407 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 AMPD2Q01433 879 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 OVGP1Q12889 678 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 POTEAQ6S8J7 498 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PCYOX1LQ8NBM8 494 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 CATSPER1Q8NEC5 780 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 COL14A1Q05707 1796 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 TM9SF1O15321 606 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 EGFRP00533 1210 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 CCND1P24385 295 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 MGAT5Q09328 741 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 RRP1BQ14684 758 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 THEMIS2Q5TEJ8 643 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 AGAP9Q5VTM2 703 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DEFB106AQ8N104 65 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 USP13Q92995 863 aaPredicted RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PBXIP1Q96AQ6 731 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 FGFBP2Q9BYJ0 223 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 UBE2OQ9C0C9 1292 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 NINJ2Q9NZG7 142 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 CFAP99D6REC4 459 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 O00370 1275 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 MGEA5O60502 916 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 POMCP01189 267 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 GHRP10912 638 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 AKT1P31749 480 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 CCR1P32246 355 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DGKZQ13574 1117 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 C16orf89Q6UX73 402 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 KIAA0319LQ8IZA0 1049 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 TSEN2Q8NCE0 465 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 ASPSCR1Q9BZE9 553 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 SPATS2LQ9NUQ6 558 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PKP3Q9Y446 797 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 TRPV2Q9Y5S1 764 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 C2CD2LO14523 706 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 EFEMP1Q12805 493 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 ARHGEF7Q14155 803 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PCBP1Q15365 356 aaKnown RBP eCLIP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DENND1BQ6P3S1 775 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 ABHD15Q6UXT9 468 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 EFL1Q7Z2Z2 1120 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PRPF39Q86UA1 669 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 MFN1Q8IWA4 741 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 MTMR14Q8NCE2 650 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 OR5B17Q8NGF7 314 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DTX3LQ8TDB6 740 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 SMARCD1Q96GM5 515 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 HES6Q96HZ4 224 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 APOL2Q9BQE5 337 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 BRD8Q9H0E9 1235 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 ING2Q9H160 280 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 AAASQ9NRG9 546 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 HEY2Q9UBP5 337 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 PCYOX1Q9UHG3 505 aa14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 DRG1Q9Y295 367 aaKnown RBP14.69□□□□□ -0.06
PCDHGA11-201ENST00000398587 RHOBTB1O94844 696 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 IFNA8P32881 189 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 HDAC4P56524 1084 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 PHF13Q86YI8 300 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 BLOC1S5Q8TDH9 187 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SLC40A1Q9NP59 571 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 UMODL1Q5DID0 1318 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 CCNE2O96020 404 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 KDELR1P24390 212 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 UNC45BQ8IWX7 931 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 HTR3CQ8WXA8 447 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SGF29Q96ES7 293 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 FAM167BQ9BTA0 163 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 MAF1Q9H063 256 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 TRPM5Q9NZQ8 1165 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 PCDHGB4Q9UN71 923 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SLC12A8A0AV02 714 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SLC15A5A6NIM6 579 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SUPT3HB4E1H0 165 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 AIM2O14862 343 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 SUPT3HO75486 399 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 NFICP08651 508 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 CHRM3P20309 590 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 DRG2P55039 364 aaKnown RBP14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 MPP3Q13368 585 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 CDH18Q13634 790 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZRANB3Q5FWF4 1079 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 EDEM1Q92611 657 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 PPP2R3CQ969Q6 453 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 DMAP1Q9NPF5 467 aaPredicted RBP14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 XPNPEP3Q9NQH7 507 aa14.68□□□□□ -0.06
PCDHGA11-201ENST00000398587 KCPQ6ZWJ8 1503 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 LOC100653049A0A140TA62 436 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 RBAK-RBAKDNI3L0D1 243 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 KRT34O76011 436 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ASS1P00966 412 aaKnown RBP14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 ALDH2P05091 517 aa14.67□□□□□ -0.06
PCDHGA11-201ENST00000398587 AMPD1P23109 780 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms