RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RBL1P28749 1068 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SDC4P31431 198 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ATXN1P54253 815 aaKnown RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CCNA1P78396 465 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PKDCCQ504Y2 493 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FAM47CQ5HY64 1035 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CCDC33Q8N5R6 958 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PCDH19Q8TAB3 1148 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TCP10LQ8TDR4 215 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CLEC4CQ8WTT0 213 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SNRNP25Q9BV90 132 aaKnown RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PCDH18Q9HCL0 1135 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CFAP73A6NFT4 308 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 EDF1O60869 148 aaKnown RBP19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 BCAR1P56945 870 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 YWHAGP61981 247 aaKnown RBP eCLIP19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ACVR2BQ13705 512 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KCNJ11Q14654 390 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KBTBD12Q3ZCT8 623 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MAP7D3Q8IWC1 876 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 OR6B3Q8NGW1 331 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 EMID1Q96A84 441 aaPredicted RBP19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 APOL6Q9BWW8 343 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ALG13Q9NP73 1137 aaKnown RBP19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SLC17A7Q9P2U7 560 aa19.08■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RBM47A0AV96 593 aaKnown RBP19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ADCY6O43306 1168 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MMP3P08254 477 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC6A3Q01959 620 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DPP9Q86TI2 863 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC35F5Q8WV83 523 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF75CPQ92670 426 aaPredicted RBP19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 FETUBQ9UGM5 382 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 GJD2Q9UKL4 321 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TEX264Q9Y6I9 313 aa19.08■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC5A9Q2M3M2 681 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TBC1D25Q3MII6 688 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 BOLA3Q53S33 107 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 RGS9BPQ6ZS82 235 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CATSPER4Q7RTX7 472 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 NT5DC4Q86YG4 428 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 OSMRQ99650 979 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 MYLK2Q9H1R3 596 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 EBF2Q9HAK2 575 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 STK38LQ9Y2H1 464 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PLXNB2O15031 1838 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 APOL1O14791 398 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SMNDC1O75940 238 aaKnown RBP eCLIP19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 KRT16P08779 473 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ATP2A2P16615 1042 aaKnown RBP19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 HDAC4P56524 1084 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SEPT7Q16181 437 aaKnown RBP19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ERP27Q96DN0 273 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CFAP36Q96G28 342 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CYTH2Q99418 400 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC4A5Q9BY07 1137 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CHKBQ9Y259 395 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 C15orf41Q9Y2V0 281 aa19.07■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZWINTO95229 277 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ANP32DO95626 131 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PDGFRBP09619 1106 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 AKAP5P24588 427 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PTK7Q13308 1070 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PDCD2Q16342 344 aaPredicted RBP19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 OTOAQ7RTW8 1153 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TMEM110Q86TL2 294 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PRPF39Q86UA1 669 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TTC39CQ8N584 583 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 OR6J1Q8NGC5 347 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 NXF3Q9H4D5 531 aaKnown RBP19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 HESX1Q9UBX0 185 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 BTBD19C9JJ37 291 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SMAPO00193 183 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZBED1O96006 694 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCDC130P13994 396 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 PDK2Q15119 407 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 STILQ15468 1287 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SOWAHAQ2M3V2 549 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF410Q86VK4 478 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 BANPQ8N9N5 519 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 CCDC110Q8TBZ0 833 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SNX27Q96L92 541 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 L3MBTL1Q9Y468 752 aa19.06■□□□□ 0.64
CHRFAM7A-202ENST00000397827 A8MUI8 341 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 A8MXQ7 604 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 FAM155BO75949 473 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 APRTP07741 180 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ADORA2BP29275 332 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 FAAP100Q0VG06 881 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 HOMEZQ8IX15 550 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SERAC1Q96JX3 654 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ADAMTS10Q9H324 1103 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 DCAF4L1Q3SXM0 396 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 SLC27A1Q6PCB7 646 aa19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZNF513Q8N8E2 541 aaPredicted RBP19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 ZC3H15Q8WU90 426 aaKnown RBP19.05■□□□□ 0.64
CHRFAM7A-202ENST00000397827 KLK14Q9P0G3 267 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms