RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 EBAG9O00559 213 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 ADAM12O43184 909 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 FBXO21O94952 628 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 OR1D2P34982 312 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 MRPS5P82675 430 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 HLTFQ14527 1009 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 EFHC1Q5JVL4 640 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 NIPA2Q8N8Q9 360 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 BCAS4Q8TDM0 211 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 ULBP1Q9BZM6 244 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 C2CD4BA6NLJ0 364 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 URODP06132 367 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 PDGFRAP16234 1089 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 FLT3P36888 993 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 MAGEA11P43364 429 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 DAB2IPQ5VWQ8 1189 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 UBL4BQ8N7F7 174 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 SPPL2BQ8TCT7 592 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 RXFP2Q8WXD0 754 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 NDRG1Q92597 394 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 KRT35Q92764 455 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 CLSTN3Q9BQT9 956 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 RAB17Q9H0T7 212 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 TMBIM4Q9HC24 238 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 CNGB3Q9NQW8 809 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 STK39Q9UEW8 545 aa20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 UTP11Q9Y3A2 253 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-204ENST00000397760 NR1D1P20393 614 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 GPD1P21695 349 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 CTNNA2P26232 953 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 SSR1P43307 286 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 ROR1Q01973 937 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 TRNP1Q6NT89 227 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 KLHL23Q8NBE8 558 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 C2orf15Q8WU43 125 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 RNPC3Q96LT9 517 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 PLAAQ9Y263 795 aa20.19■□□□□ 0.82
PDLIM2-204ENST00000397760 GOLGA6L10A0A0M3HER8 536 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 WDR27A2RRH5 827 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 FAM187AA6NFU0 413 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 TRIM66O15016 1216 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 ZBED1O96006 694 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 CTNNA1P35221 906 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 HSD17B3P37058 310 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 ZNF143P52747 638 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 DAOAP59103 153 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 SHHQ15465 462 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 DDR2Q16832 855 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 B4GALNT4Q76KP1 1039 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 TTC9BQ8N6N2 239 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 ALG3Q92685 438 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 FAM149B1Q96BN6 582 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 C8orf48Q96LL4 319 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 ASNSD1Q9NWL6 643 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 SLC27A5Q9Y2P5 690 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 PCDHA3Q9Y5H8 950 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 H0YGN5 161 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 VNN2O95498 520 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 USP17L7P0C7H9 530 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 DNAJB2P25686 324 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 BMPR1AP36894 532 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 MARCKSL1P49006 195 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 GPR15P49685 360 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 PEX5P50542 639 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 ARCQ7LC44 396 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 AUTS2Q8WXX7 1259 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 PPM1EQ8WY54 764 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 CNPY3Q9BT09 278 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 DDX47Q9H0S4 455 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 MRPL17Q9NRX2 175 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 NFS1Q9Y697 457 aa20.18■□□□□ 0.82
PDLIM2-204ENST00000397760 LINC01553A4QN01 128 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 TNFRSF10BO14763 440 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 MYZAPP0CAP1 466 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 CTNNB1P35222 781 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 SLC5A3P53794 718 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 DRG2P55039 364 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 TAS2R40P59535 323 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 YWHAZP63104 245 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 DUSP4Q13115 394 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 DHX34Q14147 1143 aaKnown RBP20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 ACAP1Q15027 740 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 MGAT5BQ3V5L5 792 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 CCDC14Q49A88 953 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 SDHAF4Q5VUM1 108 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 RHOT1Q8IXI2 618 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 C10orf67Q8IYJ2 551 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 SCAMP5Q8TAC9 235 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 CFAP57Q96MR6 1250 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 SEPT5Q99719 369 aaPredicted RBP20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 CRISPLD1Q9H336 500 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 USP3Q9Y6I4 520 aa20.17■□□□□ 0.82
PDLIM2-204ENST00000397760 DPYSL4O14531 572 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 HAPLN1P10915 354 aaPredicted RBP20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 SDC4P31431 198 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 GBP1P32455 592 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 TRADDQ15628 312 aa20.16■□□□□ 0.82
PDLIM2-204ENST00000397760 AGBL2Q5U5Z8 902 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms