RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 OXCT1P55809 520 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 IL9RQ01113 521 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 E2F5Q15329 346 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TWF2Q6IBS0 349 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MON1AQ86VX9 555 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 SH3TC2Q8TF17 1288 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ZMYND8Q9ULU4 1186 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 VPS9D1Q9Y2B5 631 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 IGLV3-25P01717 112 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ADCY8P40145 1251 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TUBP50607 506 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 HDAC4P56524 1084 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 KRT17Q04695 432 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 THEM5Q8N1Q8 247 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PAF1Q8N7H5 531 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PHF24Q9UPV7 400 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CST8O60676 142 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KIAA0754O94854 1291 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 EDN1P05305 212 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MAPK8P45983 427 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MRPS5P82675 430 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 TSPY1Q01534 308 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 C2orf54Q08AI8 447 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SOWAHAQ2M3V2 549 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 METTL21CQ5VZV1 264 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF783Q6ZMS7 281 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 TRABD2AQ86V40 505 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KLHL7Q8IXQ5 586 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 WDTC1Q8N5D0 677 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KRT14P02533 472 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PPM1AP35813 382 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF157P51786 506 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 RBM10P98175 930 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SP3Q02447 781 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 TBCCQ15814 346 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 IZUMO3Q5VZ72 239 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 LRRN4CLQ8ND94 238 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 HDAC7Q8WUI4 952 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MAML1Q92585 1016 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 USP13Q92995 863 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SNX9Q9Y5X1 595 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 IKBKGQ9Y6K9 419 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PATJQ8NI35 1801 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF185O15231 689 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PAPSS1O43252 624 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 STEAP4Q687X5 459 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 FAM171BQ6P995 826 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SLC26A11Q86WA9 606 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SIX6OS1Q8N1H7 587 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MAGEC3Q8TD91 643 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SREK1Q8WXA9 508 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SDCBP2Q9H190 292 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PCDHB8Q9UN66 801 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PLAAQ9Y263 795 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM150BA6NC51 233 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 A8MXQ7 604 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SUN1O94901 812 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 TRUB2O95900 331 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 GRK2P25098 689 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 RPL7AP62424 266 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 JADE1Q6IE81 842 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 METTL2BQ6P1Q9 378 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 GJB7Q6PEY0 223 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SAMD1Q6SPF0 538 aaPredicted RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MAEAQ7L5Y9 396 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 PLD5Q8N7P1 536 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 BCAS4Q8TDM0 211 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KBTBD7Q8WVZ9 684 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 EPB41L4BQ9H329 900 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SMOC2Q9H3U7 446 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 NXF1Q9UBU9 619 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SSX2IPQ9Y2D8 614 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 KNTC1P50748 2209 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8QA0A0J9YX86 632 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8OA6NCC3 632 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 GOLGA8NF8WBI6 632 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 BIRC5O15392 142 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 MYBL2P10244 700 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 NEFHP12036 1026 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 HOXB6P17509 224 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 CSE1LP55060 971 aaKnown RBP6.09□□□□□ -1.43
PTPRD-206ENST00000397617 ASPHQ12797 758 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 CRY1Q16526 586 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 C5orf22Q49AR2 442 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 RXFP2Q8WXD0 754 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 IFT81Q8WYA0 676 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SYT15Q9BQS2 421 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 AAASQ9NRG9 546 aa6.09□□□□□ -1.43
PTPRD-206ENST00000397617 SLC22A2O15244 555 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 RPL21P46778 160 aaKnown RBP6.09□□□□□ -1.44
PTPRD-206ENST00000397617 SP4Q02446 784 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.44
PTPRD-206ENST00000397617 ZNF394Q53GI3 561 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 UMODL1-AS1Q8N2C9 162 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 GSTCDQ8NEC7 633 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 DTX3LQ8TDB6 740 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 TRMOQ9BU70 441 aa6.09□□□□□ -1.44
PTPRD-206ENST00000397617 ASB3Q9Y575 518 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 900.6 ms