RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 VPS11Q9H270 941 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 HEY2Q9UBP5 337 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 USH1CQ9Y6N9 552 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CLUHO75153 1309 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 M0QYT0 321 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 GOT1P17174 413 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 MAP3K7CLP57077 242 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 MTFR1Q15390 333 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCDC14Q49A88 953 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 RWDD4Q6NW29 188 aaKnown RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 NOTUMQ6P988 496 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 LONP2Q86WA8 852 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 UNC5BQ8IZJ1 945 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC7A14Q8TBB6 771 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 EDEM1Q92611 657 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 FOXP3Q9BZS1 431 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 AP5M1Q9H0R1 490 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CYP3A43Q9HB55 503 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 TXLNGQ9NUQ3 528 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PAK5Q9P286 719 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 FAM189A1O60320 539 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 STK10O94804 968 aaKnown RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 SRGAP2BP0DMP2 458 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CYP3A5P20815 502 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 STIP1P31948 543 aaKnown RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC6A3Q01959 620 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CACNB2Q08289 660 aaPredicted RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 FBXO47Q5MNV8 452 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 C16orf46Q6P387 395 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCDC125Q86Z20 511 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 DEFB106AQ8N104 65 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PLD5Q8N7P1 536 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 USP6NLQ92738 828 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 LHX5Q9H2C1 402 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 RABGEF1Q9UJ41 708 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 ITGA11Q9UKX5 1188 aa10.84□□□□□ -0.67
CPSF1P1-201ENST00000397477 GOLGA8TH3BQL2 631 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 PAPSS1O43252 624 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 TOP3BO95985 862 aaKnown RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 KDSRQ06136 332 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 OTOAQ7RTW8 1153 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 DTX3LQ8TDB6 740 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 RXFP1Q9HBX9 757 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 PCDH18Q9HCL0 1135 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 FBXO6Q9NRD1 293 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 CYB561D2O14569 222 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 LGR5O75473 907 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ATICP31939 592 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC8A1P32418 973 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 GJA5P36382 358 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 NDUFV1P49821 464 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 POLNQ7Z5Q5 900 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 GPR142Q7Z601 462 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 PCDH19Q8TAB3 1148 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 FGD4Q96M96 766 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ZNF395Q9H8N7 513 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 PTPRHQ9HD43 1115 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 C2CD4BA6NLJ0 364 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 SRRM3A6NNA2 597 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ESRRAP11474 423 aaPredicted RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 EPHB2P29323 1055 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 PCK1P35558 622 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 CHI3L2Q15782 390 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ACCSLQ4AC99 568 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 SLC27A1Q6PCB7 646 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 RFWD2Q8NHY2 731 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 LPPQ93052 612 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 TBCBQ99426 244 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 UNKQ9C0B0 810 aaKnown RBP10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 ACSS2Q9NR19 701 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 SENP1Q9P0U3 644 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 CNTN6Q9UQ52 1028 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 NOD1Q9Y239 953 aa10.83□□□□□ -0.68
CPSF1P1-201ENST00000397477 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 CASTOR2A6NHX0 329 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 KPNA7A9QM74 516 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 M0QZ92 97 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ABLIM1O14639 778 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 TREHO43280 583 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 RASSF9O75901 435 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 DCTN3O75935 186 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 HAUS5O94927 633 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 MYCP01106 439 aaPredicted RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 ALDH18A1P54886 795 aaKnown RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 OLIG2Q13516 323 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 EML3Q32P44 896 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 TRMT10BQ6PF06 316 aaKnown RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 EP400NLQ6ZTU2 488 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 CCDC185Q8N715 623 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 AGAP11Q8TF27 550 aa10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 RSRC1Q96IZ7 334 aaKnown RBP10.82□□□□□ -0.68
CPSF1P1-201ENST00000397477 TINF2Q9BSI4 451 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms