RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ADGRG1Q9Y653 693 aa24.73■■□□□ 1.55
TSPAN4-203ENST00000397397 DENND4CQ5VZ89 1909 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 TCRBV5S1A1TA0A578 114 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 CYP1A2P05177 515 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 KRT3P12035 628 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 KCNA5P22460 613 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 YWHAZP63104 245 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 CYP4F8P98187 520 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 MAMLD1Q13495 774 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 SLC5A9Q2M3M2 681 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 PRSS36Q5K4E3 855 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 MRPS31Q92665 395 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 KHSRPQ92945 711 aaKnown RBP eCLIP24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 POPDC2Q9HBU9 364 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 TFR2Q9UP52 801 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 MRPS23Q9Y3D9 190 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 SCINQ9Y6U3 715 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 ANAPC1Q9H1A4 1944 aa24.72■■□□□ 1.55
TSPAN4-203ENST00000397397 SIGLEC16A6NMB1 481 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 NRG2O14511 850 aaPredicted RBP24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 RALAP11233 206 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 RARGP13631 454 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 MTHFRP42898 656 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 VAV2P52735 878 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 SNX30Q5VWJ9 437 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 SMRP1Q8NCR6 262 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 EDEM1Q92611 657 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 HLA-CQ95604 372 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 TRIM62Q9BVG3 475 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 MRPL47Q9HD33 250 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 WDR6Q9NNW5 1121 aaKnown RBP24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 ABCC13Q9NSE7 274 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 CLIC5Q9NZA1 410 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 TMEM59LQ9UK28 342 aa24.71■■□□□ 1.55
TSPAN4-203ENST00000397397 CAPN9O14815 690 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 MOSPD3O75425 235 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 DAB1O75553 588 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 FSHRP23945 695 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 TEAD2Q15562 447 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 PPP1R15BQ5SWA1 713 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 DCUN1D2Q6PH85 259 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 DEFB106AQ8N104 65 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 TXLNBQ8N3L3 684 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 JOSD2Q8TAC2 188 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 ITFG1Q8TB96 612 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 NUP85Q9BW27 656 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 TRPC7Q9HCX4 862 aa24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.7■■□□□ 1.55
TSPAN4-203ENST00000397397 CLUHO75153 1309 aa24.7■■□□□ 1.54
TSPAN4-203ENST00000397397 FYNP06241 537 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 CCDC175P0C221 793 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 NCAM1P13591 858 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 TFF2Q03403 129 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 ARHGAP15Q53QZ3 475 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 HECTD3Q5T447 861 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 RSRC2Q7L4I2 434 aaKnown RBP24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 EMC1Q8N766 993 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 RNF139Q8WU17 664 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 ING5Q8WYH8 240 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 MCEEQ96PE7 176 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 SLC2A13Q96QE2 648 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 CCSER2Q9H7U1 834 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.69■■□□□ 1.543e-6■■■□□ 18.3
TSPAN4-203ENST00000397397 CTTNBP2NLQ9P2B4 639 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 NUDT5Q9UKK9 219 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 NAALADL1Q9UQQ1 740 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 RCCD1A6NED2 376 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 TLR5O60602 858 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 CEBPBP17676 345 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 DCAF6Q58WW2 860 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 GPR158Q5T848 1215 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 TXNDC8Q6A555 127 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 BEND5Q7L4P6 421 aa24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 USP15Q9Y4E8 981 aaPredicted RBP24.69■■□□□ 1.54
TSPAN4-203ENST00000397397 C2orf78A6NCI8 922 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 RFC1P35251 1148 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 FLT3P36888 993 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 TUBP50607 506 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 RPL7AP62424 266 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 STXBP5Q5T5C0 1151 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 GET4Q7L5D6 327 aaPredicted RBP24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 ARCQ7LC44 396 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 TADA2BQ86TJ2 420 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 RXFP2Q8WXD0 754 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 RFFLQ8WZ73 363 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 NECTIN4Q96NY8 510 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 CDK5RAP1Q96SZ6 601 aaKnown RBP24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 UVRAGQ9P2Y5 699 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 COG5Q9UP83 839 aa24.68■■□□□ 1.54
TSPAN4-203ENST00000397397 PJA2O43164 708 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 OAS1P00973 400 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 DDX6P26196 483 aaKnown RBP eCLIP24.67■■□□□ 1.547e-7■■■■□ 24.1
TSPAN4-203ENST00000397397 NOS2P35228 1153 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 MATKP42679 507 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 SMAD4Q13485 552 aaKnown RBP24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 C10orf120Q5SQS8 335 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 SYPL2Q5VXT5 272 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 RHOT2Q8IXI1 618 aa24.67■■□□□ 1.54
TSPAN4-203ENST00000397397 ZNF276Q8N554 614 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms