RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 IRX4P78413 519 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 MED21Q13503 144 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 BMPR2Q13873 1038 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 SEZ6Q53EL9 994 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 LGSNQ5TDP6 509 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 TMCO4Q5TGY1 634 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 LRRC8BQ6P9F7 803 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 POLNQ7Z5Q5 900 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 SPATA18Q8TC71 538 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 SLC26A7Q8TE54 656 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 HSPH1Q92598 858 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 ATP6V0A1Q93050 837 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 RMDN3Q96TC7 470 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 MSTO1Q9BUK6 570 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 GRIP2Q9C0E4 1043 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 INIPQ9NRY2 104 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 ARHGAP28Q9P2N2 729 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 PCDHGB4Q9UN71 923 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 PCDHGB5Q9Y5G0 923 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 LOXHD1Q8IVV2 1947 aa9.52□□□□□ -0.89
CAPN3-206ENST00000397163 H0YCG3 227 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SPAG6O75602 509 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 LSM8O95777 96 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 MMP10P09238 476 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 C6orf222P0C671 652 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 KRT3P12035 628 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 VARSP26640 1264 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 PCSK6P29122 969 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SLC25A3Q00325 362 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 PGM5Q15124 567 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 EFHC1Q5JVL4 640 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SCARA3Q6AZY7 606 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SWSAP1Q6NVH7 229 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 ACAD11Q709F0 780 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 DEFB129Q9H1M3 183 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 S100A14Q9HCY8 104 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 PFDN4Q9NQP4 134 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 CNTN6Q9UQ52 1028 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 EFR3BQ9Y2G0 817 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 TEX264Q9Y6I9 313 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 PLA2G6O60733 806 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 LRCH4O75427 683 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 SLC25A11Q02978 314 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 TBCCQ15814 346 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 KCTD21Q4G0X4 260 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 ARHGEF16Q5VV41 709 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 ZCCHC23Q6ZST2 131 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 DHDDSQ86SQ9 333 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF554Q86TJ5 538 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 THNSL1Q8IYQ7 743 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 EMC1Q8N766 993 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 EFCAB3Q8N7B9 438 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 NIPA2Q8N8Q9 360 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 ZBTB8BQ8NAP8 495 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 JOSD2Q8TAC2 188 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 CCDC124Q96CT7 223 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 CGRRF1Q99675 332 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 EBF4Q9BQW3 602 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 TARS2Q9BW92 718 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 CCDC106Q9BWC9 280 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 PDGFDQ9GZP0 370 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 RAB6BQ9NRW1 208 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 TUBGCP4Q9UGJ1 667 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 HBS1LQ9Y450 684 aaKnown RBP9.51□□□□□ -0.89
CAPN3-206ENST00000397163 KAT6AQ92794 2004 aa9.51□□□□□ -0.89
CAPN3-206ENST00000397163 A0A0B4J269 797 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 LRRIQ4A6NIV6 560 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CXorf49A8MYA2 514 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 H7C0C1 242 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TOM1L1O75674 476 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ZBTB7AO95365 584 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SERPINA6P08185 405 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PABPC4LP0CB38 370 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CCDC166P0CW27 439 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PTGER2P43116 358 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ATP5OP48047 213 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PDE1BQ01064 536 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ROR1Q01973 937 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 STX3Q13277 289 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SH2D4BQ5SQS7 431 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 WDR78Q5VTH9 848 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 KYAT3Q6YP21 454 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SCARA5Q6ZMJ2 495 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ARMCX6Q7L4S7 300 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 POU5F2Q8N7G0 328 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 STKLD1Q8NE28 680 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 FAM172AQ8WUF8 416 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 APOL6Q9BWW8 343 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ZC3H7BQ9UGR2 993 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PAIP2BQ9ULR5 123 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PPME1Q9Y570 386 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CTDP1Q9Y5B0 961 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 A0A088AWK7 358 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TRIM43BA6NCK2 446 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 APOC4-APOC2K7ER74 178 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 APOC2P02655 101 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms