RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
TRIM40-207ENST00000396581 NOMO1Q15155 1222 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 Q3C1V9 767 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 TMCO4Q5TGY1 634 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 ATG16L1Q676U5 607 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 SMC1BQ8NDV3 1235 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 FAM161BQ96MY7 647 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 PANX3Q96QZ0 392 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 ZNF408Q9H9D4 720 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 RRAGCQ9HB90 399 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 TBC1D30Q9Y2I9 924 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.85□□□□□ -0.19
TRIM40-207ENST00000396581 H3BRJ5 948 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 TRDMT1O14717 391 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 MCF2LO15068 1137 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 RTN3O95197 1032 aaPredicted RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SNRPAP09012 282 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 BST1Q10588 318 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 HNRNPDQ14103 355 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 KCNT1Q5JUK3 1230 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 CES4AQ5XG92 561 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 RIPOR1Q6ZS17 1223 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 PRPF39Q86UA1 669 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 ULK2Q8IYT8 1036 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 FBXO27Q8NI29 283 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 DEPTORQ8TB45 409 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 RTP4Q96DX8 246 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 PLAC1Q9HBJ0 212 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 CPSF2Q9P2I0 782 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SORCS3Q9UPU3 1222 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 MAFBQ9Y5Q3 323 aaPredicted RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 LCTP09848 1927 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 TRIM49D1C9J1S8 452 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 I3L4J1 428 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 RFPL1O75677 317 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 KRT37O76014 449 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 LYNP07948 512 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SUPT20HL2P0C7V6 817 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 PIM1P11309 404 aaPredicted RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 MAGEA6P43360 314 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 MYL6P60660 151 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 YWHAEP62258 255 aaKnown RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 FSTL1Q12841 308 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 DENND1BQ6P3S1 775 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 ZPBP2Q6X784 338 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SPATA18Q8TC71 538 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 NCSTNQ92542 709 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 TMEM143Q96AN5 459 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 E2F7Q96AV8 911 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 FGD4Q96M96 766 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 R3HDMLQ9H3Y0 253 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 RSAD1Q9HA92 442 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 GBA2Q9HCG7 927 aaPredicted RBP13.84□□□□□ -0.19
TRIM40-207ENST00000396581 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SLC7A8Q9UHI5 535 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 CYTH4Q9UIA0 394 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
TRIM40-207ENST00000396581 SOWAHBA6NEL2 793 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 BUD23O43709 281 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 CSDE1O75534 798 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 SERPINA6P08185 405 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 GTF2A2P52657 109 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 AP2B1P63010 937 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 YWHAZP63104 245 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 DSG1Q02413 1049 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 MTM1Q13496 603 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 DBN1Q16643 649 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 AAGABQ6PD74 315 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 RFX6Q8HWS3 928 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ECSITQ9BQ95 431 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 IQCGQ9H095 443 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 POPDC2Q9HBU9 364 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 BIRC5O15392 142 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 FKBP6O75344 327 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 TRUB2O95900 331 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ENO1P06733 434 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 AOC1P19801 751 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ASPAP45381 313 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 CPA2P48052 419 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ROR1Q01973 937 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 SP2Q02086 613 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 BIRC2Q13490 618 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 C6orf163Q5TEZ5 329 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 XYLT1Q86Y38 959 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ARID3BQ8IVW6 561 aaPredicted RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 ARHGAP18Q8N392 663 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 SLC4A11Q8NBS3 891 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 KCTD6Q8NC69 237 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 MTBPQ96DY7 904 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 SIKE1Q9BRV8 207 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 NIFKQ9BYG3 293 aaKnown RBP13.83□□□□□ -0.2
TRIM40-207ENST00000396581 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
TRIM40-207ENST00000396581 MROH8Q9H579 483 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms