RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SLC32A1Q9H598 525 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 TMEM8AQ9HCN3 771 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 CSNK1G1Q9HCP0 422 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 NME7Q9Y5B8 376 aa17.27■□□□□ 0.36
DDR1-229ENST00000396342 NCOR2Q9Y618 2525 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 A0A0A0MRY4 1105 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 FAM92AA1XBS5 289 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 ZNF217O75362 1048 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 TULP3O75386 442 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 CYBBP04839 570 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 HOXB2P14652 356 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 NTSR1P30989 418 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 RDXP35241 583 aaKnown RBP17.26■□□□□ 0.35
DDR1-229ENST00000396342 ASPAP45381 313 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 NOVA1P51513 510 aaKnown RBP17.26■□□□□ 0.35
DDR1-229ENST00000396342 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
DDR1-229ENST00000396342 COG7P83436 770 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 NFIL3Q16649 462 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 LYSMD4Q5XG99 296 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 C12orf29Q8N999 325 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 TERB1Q8NA31 727 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 CEP76Q8TAP6 659 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 UCMAQ8WVF2 138 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 FAXDC2Q96IV6 333 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
DDR1-229ENST00000396342 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
DDR1-229ENST00000396342 TMEM30AQ9NV96 361 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 MAPK8IP1Q9UQF2 711 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 WDR87Q6ZQQ6 2873 aa17.26■□□□□ 0.35
DDR1-229ENST00000396342 A0A1W2PQ27 194 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 A0A1W2PQ64 194 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 A0A1W2PQD8 194 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 C4orf47A7E2U8 309 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 SGK1O00141 431 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 KCNK5O95279 499 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 SMC2O95347 1197 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 ZDHHC11BP0C7U3 371 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 RARGP13631 454 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 CHKAP35790 457 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 NDUFA8P51970 172 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 INCA1Q0VD86 236 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 STARD3Q14849 445 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 ST3GAL2Q16842 350 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 TCERG1LQ5VWI1 586 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 KLHDC10Q6PID8 442 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 TPGS1Q6ZTW0 290 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 PAQR9Q6ZVX9 377 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 SYT12Q8IV01 421 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 FAM124BQ9H5Z6 455 aaPredicted RBP17.25■□□□□ 0.35
DDR1-229ENST00000396342 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
DDR1-229ENST00000396342 NDUFS2O75306 463 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 CFIP05156 583 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TRIM49P0CI25 452 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TRIM49CP0CI26 452 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TYRP14679 529 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 HOXD12P35452 270 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 P2RY2P41231 377 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 KIR2DL1P43626 348 aaPredicted RBP17.24■□□□□ 0.35
DDR1-229ENST00000396342 DGKGP49619 791 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 MXI1P50539 228 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
DDR1-229ENST00000396342 ARID5AQ03989 594 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 STIM1Q13586 685 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 PKP1Q13835 747 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 EDRF1Q3B7T1 1238 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 UAP1L1Q3KQV9 507 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TRIM61Q5EBN2 209 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TCEAL6Q6IPX3 200 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 PSAPL1Q6NUJ1 521 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TMEM92Q6UXU6 159 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TMEM25Q86YD3 366 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 HDDC3Q8N4P3 179 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 FBXL13Q8NEE6 735 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 TCEAL3Q969E4 200 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 DUSP16Q9BY84 665 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 HESX1Q9UBX0 185 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 HPSEQ9Y251 543 aa17.24■□□□□ 0.35
DDR1-229ENST00000396342 ZNF638Q14966 1978 aaKnown RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 A0A1W2PQH9 124 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 NPC1O15118 1278 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 CYP26A1O43174 497 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 CILPO75339 1184 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 ZNF202O95125 648 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 GFPT1Q06210 699 aaPredicted RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 DPYDQ12882 1025 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 SYCP2LQ5T4T6 812 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 N4BP2L1Q5TBK1 243 aaPredicted RBP17.23■□□□□ 0.35
DDR1-229ENST00000396342 EMC10Q5UCC4 262 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 CLEC20AQ6ZU45 233 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 ARMCX6Q7L4S7 300 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 MIB1Q86YT6 1006 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 TMEFF1Q8IYR6 380 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 OLIG1Q8TAK6 271 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 TAS1R2Q8TE23 839 aa17.23■□□□□ 0.35
DDR1-229ENST00000396342 RLN3Q8WXF3 142 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms