RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KAT5Q92993 513 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 C18orf25Q96B23 403 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 ZNF333Q96JL9 665 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ZBTB45Q96K62 511 aaPredicted RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 ZNF560Q96MR9 790 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 HNRNPABQ99729 332 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 TMEM106CQ9BVX2 250 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 IMPG2Q9BZV3 1241 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 TRIM7Q9C029 511 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 FAM192AQ9GZU8 254 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 SDCBP2Q9H190 292 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 EURLQ9NYK6 297 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 RRN3Q9NYV6 651 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 GRHL1Q9NZI5 618 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 LNPEPQ9UIQ6 1025 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 ATP8A1Q9Y2Q0 1164 aa5.6□□□□□ -1.51
VPS41-203ENST00000395969 UTP11Q9Y3A2 253 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 ZNF106Q9H2Y7 1883 aaKnown RBP5.6□□□□□ -1.51
VPS41-203ENST00000395969 C17orf102A2RUQ5 167 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 RGS16O15492 202 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 CEP104O60308 925 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 STK10O94804 968 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 EOMESO95936 686 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ITGA4P13612 1032 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 TYMPP19971 482 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 GNA15P30679 374 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 POLR2BP30876 1174 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 TNFSF9P41273 254 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 PTDSS1P48651 473 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 FSCN1Q16658 493 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 WASHC2DQ5SRD0 308 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 C9orf57Q5W0N0 161 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 JADE1Q6IE81 842 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 CGB2Q6NT52 195 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 PASD1Q8IV76 773 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SLC35B2Q8TB61 432 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 GRK7Q8WTQ7 553 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 DNAJC9Q8WXX5 260 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 COPS5Q92905 334 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 PTPRN2Q92932 1015 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 RMDN2Q96LZ7 410 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SLC2A13Q96QE2 648 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ERP44Q9BS26 406 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 NUP85Q9BW27 656 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 CELF4Q9BZC1 486 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 CRISPLD2Q9H0B8 497 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 DPH5Q9H2P9 285 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SSU72Q9NP77 194 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 TOPORSQ9NS56 1045 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 DLGAP2Q9P1A6 1054 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 USH1CQ9Y6N9 552 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 OBSL1O75147 1896 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 MICAL3Q7RTP6 2002 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 FAM170AA1A519 330 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 E7ESA3 106 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 KRIT1O00522 736 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ATP5HO75947 161 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 S100BP04271 92 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 ATF7P17544 494 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 ITIH2P19823 946 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 COMTP21964 271 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ZNF143P52747 638 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 SOX10P56693 466 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 OASLQ15646 514 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 DBN1Q16643 649 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 MFSD14CQ5VZR4 134 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 FAM171BQ6P995 826 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ZDHHC24Q6UX98 284 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 DLK2Q6UY11 383 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SLC26A9Q7LBE3 791 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 LONP2Q86WA8 852 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 JAMLQ86YT9 394 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 AGGF1Q8N302 714 aaeCLIP5.59□□□□□ -1.513e-7■■■□□ 16.4
VPS41-203ENST00000395969 PCSK9Q8NBP7 692 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 FAM13CQ8NE31 585 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 FBXO22Q8NEZ5 403 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 KBTBD7Q8WVZ9 684 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 INPP5DQ92835 1189 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 GATA6Q92908 595 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 KHSRPQ92945 711 aaKnown RBP eCLIP5.59□□□□□ -1.512e-6■■□□□ 12.9
VPS41-203ENST00000395969 ADPGKQ9BRR6 497 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ROPN1BQ9BZX4 212 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 ROPN1Q9HAT0 212 aaPredicted RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 OSGEPQ9NPF4 335 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 FGFR1OP2Q9NVK5 253 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 DNAAF2Q9NVR5 837 aaKnown RBP5.59□□□□□ -1.51
VPS41-203ENST00000395969 CTTNBP2NLQ9P2B4 639 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 ATXN10Q9UBB4 475 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS41-203ENST00000395969 ACTL7BQ9Y614 415 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 GMEB1Q9Y692 573 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 PTCH2Q9Y6C5 1203 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SLC4A7Q9Y6M7 1214 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 SCN1AP35498 2009 aa5.59□□□□□ -1.51
VPS41-203ENST00000395969 A0A087WZ62 844 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 ARHGEF37A1IGU5 675 aa5.59□□□□□ -1.52
VPS41-203ENST00000395969 FAM92AA1XBS5 289 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms