RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SPRED2Q7Z698 418 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 CCDC50Q8IVM0 306 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 MYRIPQ8NFW9 859 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 SPPL3Q8TCT6 385 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 EDEM1Q92611 657 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 CENPIQ92674 756 aaPredicted RBP21.33■■□□□ 1
VCPKMT-202ENST00000395860 CEP295NLQ96MC4 621 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 NPY6RQ99463 290 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 KLHL11Q9NVR0 708 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 COMMD8Q9NX08 183 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 IL37Q9NZH6 218 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 CSPG5O95196 566 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 ZRANB2O95218 330 aaKnown RBP eCLIP21.32■■□□□ 1
VCPKMT-202ENST00000395860 KRT1P04264 644 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 HDAC4P56524 1084 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 ERVFC1P60507 584 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 SMTNL2Q2TAL5 461 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 BTBD8Q5XKL5 378 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 EXD1Q8NHP7 514 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 NT5C3BQ969T7 300 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 SAMD11Q96NU1 681 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 GDF15Q99988 308 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 TLR9Q9NR96 1032 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 ABCC13Q9NSE7 274 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 RRN3Q9NYV6 651 aa21.32■■□□□ 1
VCPKMT-202ENST00000395860 TTC7AQ9ULT0 858 aaPredicted RBP21.32■■□□□ 1
VCPKMT-202ENST00000395860 COL4A4P53420 1690 aaPredicted RBP21.32■■□□□ 1
VCPKMT-202ENST00000395860 SLC38A8A6NNN8 435 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 M0QYT0 321 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 PRRG1O14668 218 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 FGGP02679 453 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 CLUL1Q15846 466 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 LONRF2Q1L5Z9 754 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 KCNT1Q5JUK3 1230 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 PLPP4Q5VZY2 271 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 MON1AQ86VX9 555 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 SLC7A14Q8TBB6 771 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 FBXO32Q969P5 355 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 TGS1Q96RS0 853 aaKnown RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 EMILIN2Q9BXX0 1053 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ADAM33Q9BZ11 813 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 MAFFQ9ULX9 164 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 IRAK3Q9Y616 596 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ADH1AP07327 375 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ALDH1A3P47895 512 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 PITX1P78337 314 aaPredicted RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 MTMR3Q13615 1198 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 BEND5Q7L4P6 421 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ZNF572Q7Z3I7 529 aaPredicted RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 RCOR2Q8IZ40 523 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ARHGAP18Q8N392 663 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 ACSF2Q96CM8 615 aaPredicted RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 RBM41Q96IZ5 413 aaKnown RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 KLHL5Q96PQ7 755 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 PEBP4Q96S96 227 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 NAP1L3Q99457 506 aaPredicted RBP21.31■■□□□ 1
VCPKMT-202ENST00000395860 YIPF1Q9Y548 306 aa21.31■■□□□ 1
VCPKMT-202ENST00000395860 SYNJ2BP-COX16A0A087WUM0 186 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 A0A1W2PQH9 124 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 FAM92AA1XBS5 289 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 LPXNO60711 386 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 RARAP10276 462 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 DNAJB1P25685 340 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 CETN2P41208 172 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 ATXN1P54253 815 aaKnown RBP21.3■■□□□ 1
VCPKMT-202ENST00000395860 DEUP1Q05D60 604 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 SCD5Q86SK9 330 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 TCEAL8Q8IYN2 117 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 MICAL1Q8TDZ2 1067 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 HSPH1Q92598 858 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 RNF25Q96BH1 459 aaPredicted RBP21.3■■□□□ 1
VCPKMT-202ENST00000395860 COX16Q9P0S2 106 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 GMIPQ9P107 970 aa21.3■■□□□ 1
VCPKMT-202ENST00000395860 MAGED2Q9UNF1 606 aaPredicted RBP21.3■■□□□ 1
VCPKMT-202ENST00000395860 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
VCPKMT-202ENST00000395860 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
VCPKMT-202ENST00000395860 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
VCPKMT-202ENST00000395860 LRRD1A4D1F6 860 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 ENDOD1O94919 500 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 RDXP35241 583 aaKnown RBP21.29■■□□□ 1
VCPKMT-202ENST00000395860 PBX2P40425 430 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 C2orf54Q08AI8 447 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 TAF10Q12962 218 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 NME3Q13232 169 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 BOLA3Q53S33 107 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 OTUD1Q5VV17 481 aaPredicted RBP21.29■■□□□ 1
VCPKMT-202ENST00000395860 SPATA4Q8NEY3 305 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 FAM204AQ9H8W3 233 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 NMUR1Q9HB89 426 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 CALCOCO1Q9P1Z2 691 aa21.29■■□□□ 1
VCPKMT-202ENST00000395860 C2orf71A6NGG8 1288 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 EFCAB8A8MWE9 144 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 PI4K2BG5E9Z4 385 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 H0YGN5 161 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 TGM5O43548 720 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 KLRC2P26717 231 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 PGFP49763 221 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 ERVK-21P61565 698 aa21.28■■□□□ 1
VCPKMT-202ENST00000395860 CYP4V2Q6ZWL3 525 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms