RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 TULP2O00295 520 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 GDF9O60383 454 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 EPN2O95208 641 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 APBB3O95704 486 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 ADH1CP00326 375 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
CXCL12-206ENST00000395795 LRRC63Q05C16 580 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 CRY1Q16526 586 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 PLA2G2CQ5R387 149 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 ISM2Q6H9L7 571 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 TTI2Q6NXR4 508 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 PRR23CQ6ZRP0 262 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 CACNA2D4Q7Z3S7 1137 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.05■□□□□ 0.32
CXCL12-206ENST00000395795 CCDC33Q8N5R6 958 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 SMARCE1Q969G3 411 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 ACDQ96AP0 544 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 LOXL4Q96JB6 756 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 ZDHHC4Q9NPG8 344 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 SPHK2Q9NRA0 654 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 RXFP3Q9NSD7 469 aa17.05■□□□□ 0.32
CXCL12-206ENST00000395795 MYO18AQ92614 2054 aaKnown RBP17.05■□□□□ 0.32
CXCL12-206ENST00000395795 PRR5-ARHGAP8B1AHC4 643 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 TULP3O75386 442 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 GABBR2O75899 941 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 KLKB1P03952 638 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 IRF1P10914 325 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 RARGP13631 454 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 GRIA2P42262 883 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 ARHGAP8P85298 464 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 KDSRQ06136 332 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 CEP68Q76N32 757 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 DGLUCYQ7Z3D6 616 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 PIGZQ86VD9 579 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 MIB1Q86YT6 1006 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 ABCA7Q8IZY2 2146 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 ALLCQ8N6M5 410 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
CXCL12-206ENST00000395795 ZSWIM1Q9BR11 485 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 UBXN6Q9BZV1 441 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
CXCL12-206ENST00000395795 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 SH3BP1Q9Y3L3 701 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 SPTBN2O15020 2390 aa17.04■□□□□ 0.32
CXCL12-206ENST00000395795 PMM2O15305 246 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 STC2O76061 302 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 SMC2O95347 1197 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 ATP5C1P36542 298 aaKnown RBP17.03■□□□□ 0.32
CXCL12-206ENST00000395795 GAD2Q05329 585 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 CUL2Q13617 745 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 MORC3Q14149 939 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 CCDC6Q16204 474 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 DCAF17Q5H9S7 520 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-206ENST00000395795 NAT16Q8N8M0 369 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 DHTKD1Q96HY7 919 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-206ENST00000395795 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
CXCL12-206ENST00000395795 ARRDC1-AS1Q9H2J1 176 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 ARHGEF4Q9NR80 690 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 MARK1Q9P0L2 795 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 RALGAPA1Q6GYQ0 2036 aa17.03■□□□□ 0.32
CXCL12-206ENST00000395795 CACNG3O60359 315 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 STX10O60499 249 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 KLF8O95600 359 aaPredicted RBP17.02■□□□□ 0.32
CXCL12-206ENST00000395795 APODP05090 189 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 CISD3P0C7P0 127 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 BCKDHBP21953 392 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TIE1P35590 1138 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TNFRSF4P43489 277 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 SF3A2Q15428 464 aaKnown RBP17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TCERG1LQ5VWI1 586 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 PM20D1Q6GTS8 502 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 FOXR2Q6PJQ5 311 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TXNDC5Q8NBS9 432 aaKnown RBP17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TFAP2BQ92481 460 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 NDRG1Q92597 394 aaKnown RBP17.02■□□□□ 0.32
CXCL12-206ENST00000395795 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TSG101Q99816 390 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 TPSD1Q9BZJ3 242 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 SMOC1Q9H4F8 434 aa17.02■□□□□ 0.32
CXCL12-206ENST00000395795 ARMCX3Q9UH62 379 aaPredicted RBP17.02■□□□□ 0.32
CXCL12-206ENST00000395795 DCDC2BA2VCK2 349 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 RNF225M0QZC1 329 aaPredicted RBP17.01■□□□□ 0.31
CXCL12-206ENST00000395795 SLC30A4O14863 429 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 TM4SF5O14894 197 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 ZNF806P0C7X5 589 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 FMO5P49326 533 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 PDE4CQ08493 712 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 TOGARAM2Q6ZUX3 1019 aa17.01■□□□□ 0.31
CXCL12-206ENST00000395795 TTC39CQ8N584 583 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms