RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 NUDT5Q9UKK9 219 aa19.03■□□□□ 0.64
CXCL12-204ENST00000395793 HCN2Q9UL51 889 aa19.03■□□□□ 0.64
CXCL12-204ENST00000395793 PLXND1Q9Y4D7 1925 aa19.03■□□□□ 0.64
CXCL12-204ENST00000395793 A0A0A0MRY4 1105 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 TULP3O75386 442 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 KLF8O95600 359 aaPredicted RBP19.02■□□□□ 0.64
CXCL12-204ENST00000395793 ZNF806P0C7X5 589 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 KIF11P52732 1056 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 GAD2Q05329 585 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 CBWD6Q4V339 395 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 CBWD3Q5JTY5 395 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 CBWD5Q5RIA9 395 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 HTR3DQ70Z44 454 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 SLC4A11Q8NBS3 891 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 TXNDC5Q8NBS9 432 aaKnown RBP19.02■□□□□ 0.64
CXCL12-204ENST00000395793 FBXL13Q8NEE6 735 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 MDGA1Q8NFP4 955 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 TATDN2Q93075 761 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 NACA2Q9H009 215 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 PNPLA8Q9NP80 782 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.02■□□□□ 0.64
CXCL12-204ENST00000395793 PCDHA5Q9Y5H7 936 aa19.02■□□□□ 0.64
CXCL12-204ENST00000395793 TRIM49BA6NDI0 452 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 CETN3O15182 167 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 ADAM23O75077 832 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 EPB41P11171 864 aaKnown RBP19.01■□□□□ 0.63
CXCL12-204ENST00000395793 BCKDHBP21953 392 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 MPLP40238 635 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 GRIA2P42262 883 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 RAD23BP54727 409 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 COBLL1Q53SF7 1204 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 ZNF658Q5TYW1 1059 aaPredicted RBP19.01■□□□□ 0.63
CXCL12-204ENST00000395793 TCEAL6Q6IPX3 200 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 CCDC26Q8TAB7 109 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 SPATA20Q8TB22 786 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 TCEAL3Q969E4 200 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 P2RY11Q96G91 374 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 CNOT6LQ96LI5 555 aaKnown RBP19.01■□□□□ 0.63
CXCL12-204ENST00000395793 DUSP16Q9BY84 665 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 CISHQ9NSE2 258 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 RAB20Q9NX57 234 aa19.01■□□□□ 0.63
CXCL12-204ENST00000395793 RARGP13631 454 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 ATP5C1P36542 298 aaKnown RBP19■□□□□ 0.63
CXCL12-204ENST00000395793 AASDHQ4L235 1098 aaPredicted RBP19■□□□□ 0.63
CXCL12-204ENST00000395793 ANKRD40Q6AI12 368 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 CCDC186Q7Z3E2 898 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 CCDC150Q8NCX0 1101 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 RMND1Q9NWS8 449 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 PCDHGA5Q9Y5G8 931 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 USP3Q9Y6I4 520 aa19■□□□□ 0.63
CXCL12-204ENST00000395793 CNOT1A5YKK6 2376 aaKnown RBP19■□□□□ 0.63
CXCL12-204ENST00000395793 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-204ENST00000395793 TNFRSF4P43489 277 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 ANO4Q32M45 955 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 DCAF17Q5H9S7 520 aaPredicted RBP18.99■□□□□ 0.63
CXCL12-204ENST00000395793 PMS2CLQ68D20 193 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 Q6ZNB5 142 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 TTC30AQ86WT1 665 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 TERB1Q8NA31 727 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 OLIG1Q8TAK6 271 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 FAXDC2Q96IV6 333 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 HEXIM2Q96MH2 286 aaKnown RBP18.99■□□□□ 0.63
CXCL12-204ENST00000395793 GSDMAQ96QA5 445 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 COQ4Q9Y3A0 265 aa18.99■□□□□ 0.63
CXCL12-204ENST00000395793 SLC16A3O15427 465 aaKnown RBP18.98■□□□□ 0.63
CXCL12-204ENST00000395793 TRIM21P19474 475 aaKnown RBP18.98■□□□□ 0.63
CXCL12-204ENST00000395793 GBP1P32455 592 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 LIMK1P53667 647 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 ELF2Q15723 593 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 C10orf120Q5SQS8 335 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 TCERG1LQ5VWI1 586 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 BTBD8Q5XKL5 378 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 KLHDC10Q6PID8 442 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 FRMD1Q8N878 549 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 C12orf50Q8NA57 414 aaPredicted RBP18.98■□□□□ 0.63
CXCL12-204ENST00000395793 TMEM176AQ96HP8 235 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 MARK1Q9P0L2 795 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 DEC1Q9P2X7 70 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 NAGPAQ9UK23 515 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 CEP192Q8TEP8 1941 aa18.98■□□□□ 0.63
CXCL12-204ENST00000395793 BCLAF3A2AJT9 711 aaKnown RBP18.97■□□□□ 0.63
CXCL12-204ENST00000395793 TBC1D3BA6NDS4 549 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 NEDD8-MDP1E9PL57 170 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 TULP2O00295 520 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 TM4SF5O14894 197 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 CACNG3O60359 315 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 FOXD2O60548 495 aaPredicted RBP18.97■□□□□ 0.63
CXCL12-204ENST00000395793 STC2O76061 302 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 RHOBTB1O94844 696 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 CD44P16070 742 aaKnown RBP18.97■□□□□ 0.63
CXCL12-204ENST00000395793 CREB5Q02930 508 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 HSF5Q4G112 596 aaPredicted RBP18.97■□□□□ 0.63
CXCL12-204ENST00000395793 USP39Q53GS9 565 aaKnown RBP18.97■□□□□ 0.63
CXCL12-204ENST00000395793 PPM1JQ5JR12 505 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 RAB41Q5JT25 222 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 EOGTQ5NDL2 527 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 C10orf76Q5T2E6 689 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 ARHGAP17Q68EM7 881 aa18.97■□□□□ 0.63
CXCL12-204ENST00000395793 TPGS1Q6ZTW0 290 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms