RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C1orf131Q8NDD1 294 aaKnown RBP17.37■□□□□ 0.37
CXCL1-201ENST00000395761 TTC8Q8TAM2 541 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 BAP1Q92560 729 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 WBP2Q969T9 261 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 MRFAP1L1Q96HT8 127 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 FAM83CQ9BQN1 747 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 C1QTNF1Q9BXJ1 281 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 NACA2Q9H009 215 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 HEBP1Q9NRV9 189 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 THG1LQ9NWX6 298 aaKnown RBP17.37■□□□□ 0.37
CXCL1-201ENST00000395761 CFAP97Q9P2B7 532 aa17.37■□□□□ 0.37
CXCL1-201ENST00000395761 NOCTQ9UK39 431 aaKnown RBP17.37■□□□□ 0.37
CXCL1-201ENST00000395761 E5RJQ4 531 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 PAPSS1O43252 624 aaPredicted RBP17.36■□□□□ 0.37
CXCL1-201ENST00000395761 CHRNB2P17787 502 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 ATP5C1P36542 298 aaKnown RBP17.36■□□□□ 0.37
CXCL1-201ENST00000395761 ZNF75DP51815 510 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 PFKPQ01813 784 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 BSPRYQ5W0U4 402 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 CC2D1AQ6P1N0 951 aaPredicted RBP17.36■□□□□ 0.37
CXCL1-201ENST00000395761 EDEM1Q92611 657 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 PPP1R13BQ96KQ4 1090 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 CPXM1Q96SM3 734 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 KLF16Q9BXK1 252 aaPredicted RBP17.36■□□□□ 0.37
CXCL1-201ENST00000395761 PDCL3Q9H2J4 239 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 LINC00597Q9H2U6 94 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 ARHGEF3Q9NR81 526 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 GTSE1Q9NYZ3 720 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 WNT6Q9Y6F9 365 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 COL4A3Q01955 1670 aa17.36■□□□□ 0.37
CXCL1-201ENST00000395761 FBXO21O94952 628 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 ARSAP15289 507 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 ACADSBP45954 432 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 EFEMP1Q12805 493 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 TMEM31Q5JXX7 168 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 BTBD8Q5XKL5 378 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 KLHDC10Q6PID8 442 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 OSCP1Q8WVF1 389 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 IRGQQ8WZA9 623 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 DNASE1L2Q92874 299 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 PBXIP1Q96AQ6 731 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 TTYH3Q9C0H2 523 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 EBF3Q9H4W6 596 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 TRPV5Q9NQA5 729 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 HPS4Q9NQG7 708 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 DUS2Q9NX74 493 aaKnown RBP17.35■□□□□ 0.37
CXCL1-201ENST00000395761 DNMT3LQ9UJW3 386 aa17.35■□□□□ 0.37
CXCL1-201ENST00000395761 OTOL1A6NHN0 477 aaPredicted RBP17.34■□□□□ 0.37
CXCL1-201ENST00000395761 SHISA7A6NL88 538 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 ADCY5O95622 1261 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 ERBB2P04626 1255 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 FYNP06241 537 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 IRF1P10914 325 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 CDH5P33151 784 aaPredicted RBP17.34■□□□□ 0.37
CXCL1-201ENST00000395761 SOX9P48436 509 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 FMO1Q01740 532 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 CDR2Q01850 454 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 MLF2Q15773 248 aaPredicted RBP17.34■□□□□ 0.37
CXCL1-201ENST00000395761 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
CXCL1-201ENST00000395761 MIB1Q86YT6 1006 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 TMEM35BQ8NCS4 154 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 CSGALNACT1Q8TDX6 532 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 CDK5RAP1Q96SZ6 601 aaKnown RBP17.34■□□□□ 0.37
CXCL1-201ENST00000395761 PCDHB18PQ96TA0 734 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 LRFN3Q9BTN0 628 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 RASAL2Q9UJF2 1139 aa17.34■□□□□ 0.37
CXCL1-201ENST00000395761 ITIH6Q6UXX5 1313 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 LRRC53A6NM62 1247 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 GREM1O60565 184 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 LTFP02788 710 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 CD72P21854 359 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 CDC25BP30305 580 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 PDGFRLQ15198 375 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 TAF5Q15542 800 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 EML3Q32P44 896 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 PTPN20Q4JDL3 420 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 E4F1Q66K89 784 aaPredicted RBP17.33■□□□□ 0.36
CXCL1-201ENST00000395761 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 BMP8AQ7Z5Y6 402 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 DDX42Q86XP3 938 aaKnown RBP eCLIP17.33■□□□□ 0.36
CXCL1-201ENST00000395761 ZNF677Q86XU0 584 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 VSTM4Q8IW00 320 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 CPA5Q8WXQ8 436 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 PIWIL1Q96J94 861 aaKnown RBP17.33■□□□□ 0.36
CXCL1-201ENST00000395761 NOX5Q96PH1 765 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 TBC1D17Q9HA65 648 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 ABCC13Q9NSE7 274 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 MARCH2Q9P0N8 246 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 MYO6Q9UM54 1294 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 CEP83Q9Y592 693 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 PIAS3Q9Y6X2 628 aa17.33■□□□□ 0.36
CXCL1-201ENST00000395761 HELZP42694 1942 aaKnown RBP17.32■□□□□ 0.36
CXCL1-201ENST00000395761 E2F8A0AVK6 867 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 PRR33A8MZF0 331 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 HMBSP08397 361 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 FERP16591 822 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 IFNAR2P48551 515 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 STARD6P59095 220 aa17.32■□□□□ 0.36
CXCL1-201ENST00000395761 RUNX3Q13761 415 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms