RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 NMUR1Q9HB89 426 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 NAALADL1Q9UQQ1 740 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 CHD9Q3L8U1 2897 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 ATG2AQ2TAZ0 1938 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 PRRG1O14668 218 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 RNF8O76064 485 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 KLRC2P26717 231 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 CA8P35219 290 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 ALDH1A3P47895 512 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 CLCN4P51793 760 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 HDAC4P56524 1084 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 SMAD3P84022 425 aaKnown RBP15.8■□□□□ 0.12
PTPN20-206ENST00000395722 RAB6CQ53S08 254 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 DCAF6Q58WW2 860 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-206ENST00000395722 FAM172AQ8WUF8 416 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 GOLGA1Q92805 767 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 PGAP3Q96FM1 320 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-206ENST00000395722 TRMT2BQ96GJ1 504 aaKnown RBP15.8■□□□□ 0.12
PTPN20-206ENST00000395722 PBKQ96KB5 322 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 TBCBQ99426 244 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 RAB6CQ9H0N0 254 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 ABCC13Q9NSE7 274 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 EHD2Q9NZN4 543 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 GMIPQ9P107 970 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 STAP1Q9ULZ2 295 aa15.8■□□□□ 0.12
PTPN20-206ENST00000395722 MTCL1Q9Y4B5 1905 aaKnown RBP15.79■□□□□ 0.12
PTPN20-206ENST00000395722 A0A1W2PQH9 124 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 KCNK3O14649 394 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 LPXNO60711 386 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 SRGAP2O75044 1071 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 GLUD1P00367 558 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CSH1P0DML2 217 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CSH2P0DML3 217 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 IL1R2P27930 398 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 MIPP30301 263 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 PITX1P78337 314 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-206ENST00000395722 ATP11AP98196 1134 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 IFRD2Q12894 506 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-206ENST00000395722 PLD1Q13393 1074 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 RTL10Q7L3V2 364 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CREG2Q8IUH2 290 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 KATNAL2Q8IYT4 538 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 KREMEN2Q8NCW0 462 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 OVCA2Q8WZ82 227 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 FBXO32Q969P5 355 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 SLC28A3Q9HAS3 691 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 OSER1Q9NX31 292 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CALCOCO1Q9P1Z2 691 aa15.79■□□□□ 0.12
PTPN20-206ENST00000395722 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 TRUB2O95900 331 aaKnown RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 IGLV3-25P01717 112 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 CXCR5P32302 372 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 PSEN1P49768 467 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SULT1E1P49888 294 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 DNA2P51530 1060 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 RWDD2BP57060 319 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 TWF1Q12792 350 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 TAF10Q12962 218 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 WHAMMP3Q1A5X7 153 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 TXNRD3NBQ6F5E7 133 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 RASGEF1CQ8N431 466 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 MICAL1Q8TDZ2 1067 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SLC22A17Q8WUG5 538 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 EDEM1Q92611 657 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 PEBP4Q96S96 227 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 PSMB7Q99436 277 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 EPOPA6NHQ4 379 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 CAPN9O14815 690 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 ZNF185O15231 689 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SPATA31D3P0C874 917 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 NCAM1P13591 858 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 DESP17661 470 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 EIF4EBP2Q13542 120 aaPredicted RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 HADHQ16836 314 aaKnown RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SNX30Q5VWJ9 437 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 BTBD8Q5XKL5 378 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 MSANTD2Q6P1R3 559 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SPATA31D4Q6ZUB0 917 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 ZNF276Q8N554 614 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SLC7A14Q8TBB6 771 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 DQX1Q8TE96 717 aaKnown RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 PSMG2Q969U7 264 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 CERS4Q9HA82 394 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 TTC7AQ9ULT0 858 aaPredicted RBP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 USP18Q9UMW8 372 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTPN20-206ENST00000395722 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
PTPN20-206ENST00000395722 KRT7P08729 469 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 EPHB3P54753 998 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 VEPH1Q14D04 833 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 CDO1Q16878 200 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 PDZD8Q8NEN9 1154 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 HDAC7Q8WUI4 952 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 ARNTL2Q8WYA1 636 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 TIFAQ96CG3 184 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 SLITRK1Q96PX8 696 aa15.77■□□□□ 0.12
PTPN20-206ENST00000395722 SMOC2Q9H3U7 446 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms