RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 NUMA1Q14980 2115 aa16.79■□□□□ 0.28
SNCA-205ENST00000394991 TP53BP1Q12888 1972 aaPredicted RBP16.78■□□□□ 0.28
SNCA-205ENST00000394991 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
SNCA-205ENST00000394991 CACNG3O60359 315 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 GREM1O60565 184 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 ZDHHC11BP0C7U3 371 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 HOXD13P35453 343 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 PGFP49763 221 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 SLC5A3P53794 718 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 SURF1Q15526 300 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 BRAPQ7Z569 592 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 GLRX5Q86SX6 157 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 HNRNPLLQ8WVV9 542 aaKnown RBP16.78■□□□□ 0.28
SNCA-205ENST00000394991 MRGPRX1Q96LB2 322 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 FAM124BQ9H5Z6 455 aaPredicted RBP16.78■□□□□ 0.28
SNCA-205ENST00000394991 IL37Q9NZH6 218 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 HSPBP1Q9NZL4 362 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 SUSD2Q9UGT4 822 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 RAXQ9Y2V3 346 aa16.78■□□□□ 0.28
SNCA-205ENST00000394991 FLNBO75369 2602 aaKnown RBP16.78■□□□□ 0.28
SNCA-205ENST00000394991 SHROOM3Q8TF72 1996 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 A0A087X0B3 334 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 A8MXQ7 604 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 NEDD8-MDP1E9PL57 170 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 NDUFS2O75306 463 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 FAM163BP0C2L3 166 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 TUBP50607 506 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 KIAA1324Q6UXG2 1013 aaKnown RBP16.77■□□□□ 0.28
SNCA-205ENST00000394991 NUDT18Q6ZVK8 323 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 FAM35AQ86V20 835 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 HPS3Q969F9 1004 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 IL21RQ9HBE5 538 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 CACNA2D2Q9NY47 1150 aa16.77■□□□□ 0.28
SNCA-205ENST00000394991 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
SNCA-205ENST00000394991 FAM92AA1XBS5 289 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 WASH3PC4AMC7 463 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 DLATP10515 647 aaKnown RBP16.76■□□□□ 0.27
SNCA-205ENST00000394991 TYRP14679 529 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 TNNC1P63316 161 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 WDR72Q3MJ13 1102 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 C8orf34Q49A92 452 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 SYCP2LQ5T4T6 812 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 LARP1BQ659C4 914 aaKnown RBP16.76■□□□□ 0.27
SNCA-205ENST00000394991 SDE2Q6IQ49 451 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 SPRYD3Q8NCJ5 442 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 DNASE2BQ8WZ79 361 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 FOXJ1Q92949 421 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 CGRRF1Q99675 332 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 BBS2Q9BXC9 721 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 GZF1Q9H116 711 aaPredicted RBP16.76■□□□□ 0.27
SNCA-205ENST00000394991 XYLT2Q9H1B5 865 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 TOR4AQ9NXH8 423 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
SNCA-205ENST00000394991 BPTFQ12830 3046 aa16.76■□□□□ 0.27
SNCA-205ENST00000394991 ZBTB24O43167 697 aaPredicted RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 TLR5O60602 858 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 CISD3P0C7P0 127 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 GNSP15586 552 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 MYL6P60660 151 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 BNC1Q01954 994 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 RABEP1Q15276 862 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 WDR45BQ5MNZ6 344 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 TPGS1Q6ZTW0 290 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 MARCH9Q86YJ5 346 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 ZCCHC9Q8N567 271 aaKnown RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 RDH13Q8NBN7 331 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 ZMIZ2Q8NF64 920 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 BAHD1Q8TBE0 780 aaPredicted RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 SCFD1Q8WVM8 642 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 P2RY11Q96G91 374 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 KLF16Q9BXK1 252 aaPredicted RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 ZDHHC5Q9C0B5 715 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 SMYD3Q9H7B4 428 aa16.75■□□□□ 0.27
SNCA-205ENST00000394991 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 NXF1Q9UBU9 619 aaKnown RBP16.75■□□□□ 0.27
SNCA-205ENST00000394991 A0A1B0GTW7 788 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 ZIC2O95409 532 aaPredicted RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 TBX18O95935 607 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 TNNI1P19237 187 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 CD6P30203 668 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 STAT6P42226 847 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 CDH8P55286 799 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 PSMD6Q15008 389 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 SNRNP35Q16560 246 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 CCDC73Q6ZRK6 1079 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 TMPRSS7Q7RTY8 843 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 CCDC127Q96BQ5 260 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 TOE1Q96GM8 510 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 LRIG1Q96JA1 1093 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 XPO6Q96QU8 1125 aaKnown RBP16.74■□□□□ 0.27
SNCA-205ENST00000394991 MED10Q9BTT4 135 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
SNCA-205ENST00000394991 NACA2Q9H009 215 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms