RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 KRT34O76011 436 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 RBL1P28749 1068 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 SPRP35270 261 aaPredicted RBP12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 ANKRD20A4Q4UJ75 823 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 MTHFD1LQ6UB35 978 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 CCNJLQ8IV13 435 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 AGAP3Q96P47 875 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 DPP3Q9NY33 737 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 THEGQ9P2T0 379 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 TSPAN16Q9UKR8 245 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 SNCAIPQ9Y6H5 919 aa12.08□□□□□ -0.47
UBE2D3-209ENST00000394804 ZNF536O15090 1300 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 KRT36O76013 467 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 TRUB2O95900 331 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 CETPP11597 493 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 SULT1E1P49888 294 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 KLF1Q13351 362 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ANKRD22Q5VYY1 191 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 NUF2Q9BZD4 464 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 NOL3O60936 208 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 CFHP08603 1231 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 RPL10AP62906 217 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 BST1Q10588 318 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 NME3Q13232 169 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 PDK1Q15118 436 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 RARS2Q5T160 578 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ITPRIPL1Q6GPH6 555 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 DENND5BQ6ZUT9 1274 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 FNIP1Q8TF40 1166 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 C10orf82Q8WW14 230 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ACO2Q99798 780 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 EFHD1Q9BUP0 239 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 MMADHCQ9H3L0 296 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 DHX33Q9H6R0 707 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ARL8BQ9NVJ2 186 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 FETUBQ9UGM5 382 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 DCDC2Q9UHG0 476 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 SOX13Q9UN79 622 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 FIS1Q9Y3D6 152 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ATP9BO43861 1147 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 TRPA1O75762 1119 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ATP5BP06576 529 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 CYP2C8P10632 490 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 CYP2F1P24903 491 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 IVDP26440 423 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 NDST1P52848 882 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 FNBP1LQ5T0N5 605 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ACOT1Q86TX2 421 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC44A1Q8WWI5 657 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF560Q96MR9 790 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 SHCBP1LQ9BZQ2 653 aa12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 DENND2DQ9H6A0 471 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-209ENST00000394804 MAFO75444 373 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 CACNA2D1P54289 1103 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 DEUP1Q05D60 604 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 MMRN1Q13201 1228 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 RPS6KA2Q15349 733 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GALNTL6Q49A17 601 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 DPP9Q86TI2 863 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 MAB21L3Q8N8X9 362 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ZBTB10Q96DT7 871 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GGA3Q9NZ52 723 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 E5RJQ4 531 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 CASQ2O14958 399 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 PDGFRBP09619 1106 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GNAT1P11488 350 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GRK2P25098 689 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ACADSBP45954 432 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 BLMHQ13867 455 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 C15orf59Q2T9L4 293 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 C4orf50Q6ZRC1 276 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 CCDC33Q8N5R6 958 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 CCNYL1Q8N7R7 359 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 STKLD1Q8NE28 680 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC35B2Q8TB61 432 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF669Q96BR6 464 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ASB7Q9H672 318 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ETNK2Q9NVF9 386 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms