RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PPP1R21Q6ZMI0 780 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 LRRC74BQ6ZQY2 392 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ILDR2Q71H61 639 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 PRR11Q96HE9 360 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-204ENST00000394601 INO80BQ9C086 356 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-204ENST00000394601 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 NME7Q9Y5B8 376 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SUPT3HO75486 399 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ITGB3P05106 788 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 IL4RP24394 825 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SLC26A2P50443 739 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 POU5F1BQ06416 359 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SYCP2LQ5T4T6 812 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 MOB2Q70IA6 237 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ANKMY2Q8IV38 441 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 EXOC8Q8IYI6 725 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 TUBGCP5Q96RT8 1024 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 CCDC77Q9BR77 488 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 FRMD8P1Q9BZ68 369 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SHCBP1LQ9BZQ2 653 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SLC24A2Q9UI40 661 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 NUMBLQ9Y6R0 609 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 RALGAPA2Q2PPJ7 1873 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 KRT7P08729 469 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 FAM200BP0CF97 657 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SSTR1P30872 391 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 KDSRQ06136 332 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 INCA1Q0VD86 236 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 NR1H3Q13133 447 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 TFDP1Q14186 410 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ACBD5Q5T8D3 534 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-204ENST00000394601 SH2D5Q6ZV89 423 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 PPIL6Q8IXY8 311 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 AGTPBP1Q9UPW5 1226 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 LIN7AO14910 233 aaPredicted RBP16.15■□□□□ 0.18
PTBP1-204ENST00000394601 SLC25A27O95847 323 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 KITP10721 976 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 ZRSR2Q15696 482 aaKnown RBP16.15■□□□□ 0.18
PTBP1-204ENST00000394601 HIF1AQ16665 826 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 OR52E8Q6IFG1 317 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 ADGRD1Q6QNK2 874 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 CENPUQ71F23 418 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 NLRP9Q7RTR0 991 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.15■□□□□ 0.183e-7■■■□□ 14.9
PTBP1-204ENST00000394601 DCAKDQ8WVC6 231 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 CCDC124Q96CT7 223 aaKnown RBP16.15■□□□□ 0.18
PTBP1-204ENST00000394601 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 ZNF333Q96JL9 665 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 SMARCAD1Q9H4L7 1026 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 DCLRE1BQ9H816 532 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 RPF1Q9H9Y2 349 aaKnown RBP16.15■□□□□ 0.18
PTBP1-204ENST00000394601 PLAC1Q9HBJ0 212 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 STARD13Q9Y3M8 1113 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 APOC4-APOC2K7ER74 178 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 HBP1O60381 514 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 GABBR2O75899 941 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 IFNB1P01574 187 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 APOC2P02655 101 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 MMRN1Q13201 1228 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 PDK4Q16654 411 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 CNPY1Q3B7I2 92 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 ZNF667Q5HYK9 610 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 KHSRPQ92945 711 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTBP1-204ENST00000394601 USP18Q9UMW8 372 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 LRCH1Q9Y2L9 728 aa16.15■□□□□ 0.18
PTBP1-204ENST00000394601 NOP56O00567 594 aaKnown RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 MED7O43513 233 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 CD19P15391 556 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 CPB2Q96IY4 423 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 SSU72Q9NP77 194 aaKnown RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 KRT19P08727 400 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 COG7P83436 770 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 PKDCCQ504Y2 493 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 SLC7A6OSQ96CW6 309 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 ACSS3Q9H6R3 686 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 MARCOQ9UEW3 520 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 PCSK1NQ9UHG2 260 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 MCF2P10911 925 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 ATP6V1B1P15313 513 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 ARF4P18085 180 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 AMPD1P23109 780 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 POLR2BP30876 1174 aaKnown RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 ZNF143P52747 638 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-204ENST00000394601 IGBP1P78318 339 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 PCGF5Q86SE9 256 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 TTC7BQ86TV6 843 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 KBTBD2Q8IY47 623 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 VCX3BQ9H321 246 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 VCX3AQ9NNX9 186 aa16.14■□□□□ 0.17
PTBP1-204ENST00000394601 PSMC3IPQ9P2W1 217 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms