RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TESPA1A2RU30 521 aaPredicted RBP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 H3BNX3 289 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 FAM155BO75949 473 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 PHKA2P46019 1235 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ZNF200P98182 395 aaPredicted RBP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ENPEPQ07075 957 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ZNF423Q2M1K9 1284 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 RWDD4Q6NW29 188 aaKnown RBP19.57■□□□□ 0.72
HOXC6-202ENST00000394331 ACTRT2Q8TDY3 377 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 PAFAH2Q99487 392 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 RAB20Q9NX57 234 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 PCDHA10Q9Y5I2 948 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 SQORQ9Y6N5 450 aa19.57■□□□□ 0.72
HOXC6-202ENST00000394331 BGNP21810 368 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 ALDH1A3P47895 512 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 GPX6P59796 221 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 KBTBD6Q86V97 674 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 TTC13Q8NBP0 860 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 GIPC3Q8TF64 312 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 DCAKDQ8WVC6 231 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 SGF29Q96ES7 293 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 GCNAQ96QF7 691 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 CGREF1Q99674 301 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 SENP7Q9BQF6 1050 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 KLC2Q9H0B6 622 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 FAM58BPP0C7Q3 252 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 RAG1P15918 1043 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 NAA20P61599 178 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 TNFAIP1Q13829 316 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 GRAMD1BQ3KR37 738 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 NSMFQ6X4W1 530 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 ENOSF1Q7L5Y1 443 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 RAB3IL1Q8TBN0 382 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 MYOZ2Q9NPC6 264 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 INPP5FQ9Y2H2 1132 aa19.56■□□□□ 0.72
HOXC6-202ENST00000394331 ZNF23P17027 643 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 PPARGP37231 505 aaPredicted RBP19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CXCL9Q07325 125 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 MAP7D1Q3KQU3 841 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 TBC1D10BQ4KMP7 808 aaPredicted RBP19.55■□□□□ 0.72
HOXC6-202ENST00000394331 RRN3Q9NYV6 651 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CROTQ9UKG9 612 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 I3L4J1 428 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 PSTPIP1O43586 416 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 RALAP11233 206 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 HDAC4P56524 1084 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 RNASEH2BQ5TBB1 312 aaKnown RBP19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ACAD10Q6JQN1 1059 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 GSTA5Q7RTV2 222 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 LZTR1Q8N653 840 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 TAS1R2Q8TE23 839 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ATP6V0A1Q93050 837 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 GPRASP2Q96D09 838 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ACP6Q9NPH0 428 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 HESX1Q9UBX0 185 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ITGA11Q9UKX5 1188 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 COL4A5P29400 1685 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CLUHO75153 1309 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CAPN8A6NHC0 703 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ARHGAP42A6NI28 874 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 H3BSA7 217 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CRTAMO95727 393 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 COL6A2P12110 1019 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 MAPK4P31152 587 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CYP24A1Q07973 514 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CIAPIN1Q6FI81 312 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 CEP170P1Q96L14 293 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 AVENQ9NQS1 362 aaPredicted RBP19.55■□□□□ 0.72
HOXC6-202ENST00000394331 PSMD13Q9UNM6 376 aa19.55■□□□□ 0.72
HOXC6-202ENST00000394331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 E5RJQ4 531 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 SRGAP2CP0DJJ0 459 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 SRGAP2BP0DMP2 458 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ACAT1P24752 427 aaKnown RBP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 CCND2P30279 289 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ALDH3B2P48448 385 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ERFP50548 548 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 TGFBIQ15582 683 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ATG16L1Q676U5 607 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 SH2D5Q6ZV89 423 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 CCDC33Q8N5R6 958 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 TBC1D23Q9NUY8 699 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 FUOMA2VDF0 154 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 PRR5-ARHGAP8B1AHC4 643 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ZC3H11AO75152 810 aaKnown RBP eCLIP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ATP6V1B1P15313 513 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ARHGAP8P85298 464 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 CNGA3Q16281 694 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 CCDC153Q494R4 210 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 THOC7Q6I9Y2 204 aaKnown RBP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 SV2AQ7L0J3 742 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 VSIG10LQ86VR7 867 aa19.54■□□□□ 0.72
HOXC6-202ENST00000394331 STN1Q9H668 368 aaKnown RBP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
HOXC6-202ENST00000394331 ZNFX1Q9P2E3 1918 aaKnown RBP19.53■□□□□ 0.72
HOXC6-202ENST00000394331 SOBPA7XYQ1 873 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 MT-ND3P03897 115 aa19.53■□□□□ 0.72
HOXC6-202ENST00000394331 GARTP22102 1010 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms