RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 SMPD1P17405 629 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 SLC18A1P54219 525 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 CCDC15Q0P6D6 951 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 RGS9BPQ6ZS82 235 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 DPP9Q86TI2 863 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 MAP7D3Q8IWC1 876 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 RFWD2Q8NHY2 731 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 CCDC110Q8TBZ0 833 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 KHSRPQ92945 711 aaKnown RBP eCLIP20.35■□□□□ 0.85
RCCD1-201ENST00000394258 SERAC1Q96JX3 654 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 DHRS4Q9BTZ2 278 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 PCDH18Q9HCL0 1135 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 IKBKGQ9Y6K9 419 aa20.35■□□□□ 0.85
RCCD1-201ENST00000394258 ATP2A2P16615 1042 aaKnown RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 ADORA2BP29275 332 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 HOXA11P31270 313 aaPredicted RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 PTK7Q13308 1070 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 FAM47CQ5HY64 1035 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 CATSPER4Q7RTX7 472 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 PRPF39Q86UA1 669 aaKnown RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 SESTD1Q86VW0 696 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 CTAGE3PQ8IX95 158 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 CYTH2Q99418 400 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 OSMRQ99650 979 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 TRIM56Q9BRZ2 755 aaKnown RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 VTA1Q9NP79 307 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 KLK14Q9P0G3 267 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 NR2E3Q9Y5X4 410 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 F5H423 210 aaPredicted RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 APOL1O14791 398 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 ZBED1O96006 694 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 MT-ND3P03897 115 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 EPHX2P34913 555 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 SLC6A3Q01959 620 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 FAAP100Q0VG06 881 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 KCNJ11Q14654 390 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 TAF1BQ53T94 588 aaPredicted RBP20.34■□□□□ 0.85
RCCD1-201ENST00000394258 BANPQ8N9N5 519 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 SHCBP1Q8NEM2 672 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 HESX1Q9UBX0 185 aa20.34■□□□□ 0.85
RCCD1-201ENST00000394258 ENO4A6NNW6 628 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 A8MXQ7 604 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 LCP1P13796 627 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 CCDC130P13994 396 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 GRM5P41594 1212 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 LRRC6Q86X45 466 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 PPCSQ9HAB8 311 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 EBF2Q9HAK2 575 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 CYLDQ9NQC7 956 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 KANSL3Q9P2N6 904 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 GJD2Q9UKL4 321 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 KIAA1257Q9ULG3 409 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 TEX264Q9Y6I9 313 aa20.33■□□□□ 0.85
RCCD1-201ENST00000394258 ZWINTO95229 277 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 HDAC4P56524 1084 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 CCNA1P78396 465 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 BOLA3Q53S33 107 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 BZW1Q7L1Q6 419 aaKnown RBP20.33■□□□□ 0.84
RCCD1-201ENST00000394258 MTDHQ86UE4 582 aaKnown RBP20.33■□□□□ 0.84
RCCD1-201ENST00000394258 NETO2Q8NC67 525 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 MICAL1Q8TDZ2 1067 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 NXF3Q9H4D5 531 aaKnown RBP20.33■□□□□ 0.84
RCCD1-201ENST00000394258 TXLNGQ9NUQ3 528 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 C15orf41Q9Y2V0 281 aa20.33■□□□□ 0.84
RCCD1-201ENST00000394258 ADCY6O43306 1168 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 INHBAP08476 426 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 ZNF200P98182 395 aaPredicted RBP20.32■□□□□ 0.84
RCCD1-201ENST00000394258 RASA2Q15283 850 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 KYAT1Q16773 422 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 NLRP9Q7RTR0 991 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 CCDC125Q86Z20 511 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 PPM1NQ8N819 430 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 OR6J1Q8NGC5 347 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 KCNV2Q8TDN2 545 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 SLC35F5Q8WV83 523 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 SLC7A6OSQ96CW6 309 aaPredicted RBP20.32■□□□□ 0.84
RCCD1-201ENST00000394258 ZNF570Q96NI8 536 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 FAM167BQ9BTA0 163 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 KATNBL1Q9H079 304 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 DHX35Q9H5Z1 703 aaKnown RBP20.32■□□□□ 0.84
RCCD1-201ENST00000394258 LMO2P25791 158 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 ZNF618Q5T7W0 954 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 NKX1-2Q9UD57 310 aaPredicted RBP20.32■□□□□ 0.84
RCCD1-201ENST00000394258 CEP350Q5VT06 3117 aa20.32■□□□□ 0.84
RCCD1-201ENST00000394258 C2orf71A6NGG8 1288 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 LPXNO60711 386 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 MMP3P08254 477 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 PYGBP11216 843 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 SKIV2L2P42285 1042 aaKnown RBP20.31■□□□□ 0.84
RCCD1-201ENST00000394258 GBE1Q04446 702 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 SOWAHAQ2M3V2 549 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 PKDCCQ504Y2 493 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 SLC4A5Q9BY07 1137 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 MYO18AQ92614 2054 aaKnown RBP20.31■□□□□ 0.84
RCCD1-201ENST00000394258 NEFHP12036 1026 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 EPHB2P29323 1055 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 YWHAZP63104 245 aaKnown RBP20.31■□□□□ 0.84
RCCD1-201ENST00000394258 PDK2Q15119 407 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 PRAMEF19Q5SWL8 479 aa20.31■□□□□ 0.84
RCCD1-201ENST00000394258 TMEM110Q86TL2 294 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms