RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 CAPNS1P04632 268 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 PYGMP11217 842 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TARSP26639 723 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 RNF144AP50876 292 aaPredicted RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 CRYBB1P53674 252 aaPredicted RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 YARSP54577 528 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 GPC5P78333 572 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 MRPS6P82932 125 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 MESDQ14696 234 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 RPS6KA1Q15418 735 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ZKSCAN8Q15776 578 aaPredicted RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 PTGISQ16647 500 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 CLEC16AQ2KHT3 1053 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 DCAF4L1Q3SXM0 396 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TAF2Q6P1X5 1199 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 RSRC2Q7L4I2 434 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 STK35Q8TDR2 534 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SNRNP27Q8WVK2 155 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 ZNF606Q8WXB4 792 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TFAP2BQ92481 460 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ANKRD7Q92527 254 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ZFP42Q96MM3 310 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TWNKQ96RR1 684 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SLC9A7Q96T83 725 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 NUP85Q9BW27 656 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TRIM7Q9C029 511 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 UPF3AQ9H1J1 476 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 ASB7Q9H672 318 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 BRD7Q9NPI1 651 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 CACNG4Q9UBN1 327 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 CNOT8Q9UFF9 292 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 CEP83Q9Y592 693 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 THSD7BQ9C0I4 1608 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 NCANO14594 1321 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ABHD14A-ACY1A0A1B0GW23 586 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 DYTNA2CJ06 578 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 M0QZ92 97 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 RPS6KA5O75582 802 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 CHRNA1P02708 482 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ASGR2P07307 311 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 JMJD7P0C870 316 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 GZMAP12544 262 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 RRM1P23921 792 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 HOXC8P31273 242 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SOX18P35713 384 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 NSFP46459 744 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 MARCKSL1P49006 195 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 RPIAP49247 311 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 CDC42EP1Q00587 391 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 LLGL1Q15334 1064 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 IFI16Q16666 785 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 ARSJQ5FYB0 599 aaPredicted RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 UBXN11Q5T124 520 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 DAB2IPQ5VWQ8 1189 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ACAD10Q6JQN1 1059 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 NLRC3Q7RTR2 1065 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 NKAPQ8N5F7 415 aaKnown RBP6.19□□□□□ -1.42
CASC3-202ENST00000394114 RNF169Q8NCN4 708 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 ARRDC4Q8NCT1 418 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 TAF4BQ92750 862 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SNX27Q96L92 541 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 FAM81BQ96LP2 452 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 DMTF1Q9Y222 760 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 GIT1Q9Y2X7 761 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 DGKBQ9Y6T7 804 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SZT2Q5T011 3432 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 A0A0A6YYK5 440 aaPredicted RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 ERICH4A6NGS2 130 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 BTNL10A8MVZ5 291 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 CEP104O60308 925 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 GHRP10912 638 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 UNGP13051 313 aaPredicted RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 TCP1P17987 556 aaKnown RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 HOXD10P28358 340 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 RENBPP51606 427 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 BPIFB4P59827 614 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 ZNF252P-AS1Q0IIN9 211 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 LVRNQ6Q4G3 990 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 NT5DC3Q86UY8 548 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 SERINC5Q86VE9 423 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 SULF2Q8IWU5 870 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 PDCL2Q8N4E4 241 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 KLHDC9Q8NEP7 349 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 OR2W6PQ8NHA6 318 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 ZNF564Q8TBZ8 553 aaPredicted RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 RABGGTAQ92696 567 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 LPPQ93052 612 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 PNKPQ96T60 521 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 AGO3Q9H9G7 860 aaKnown RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 ST3GAL5Q9UNP4 418 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 SNX9Q9Y5X1 595 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 PDCD11Q14690 1871 aaKnown RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 RALGAPA2Q2PPJ7 1873 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 HCRTO43612 131 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 PABPC1P11940 636 aaKnown RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 CD52P31358 61 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 IGFALSP35858 605 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 MAP2K2P36507 400 aa6.18□□□□□ -1.42
CASC3-202ENST00000394114 RECQLP46063 649 aaPredicted RBP6.18□□□□□ -1.42
CASC3-202ENST00000394114 AFF1P51825 1210 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms