RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 EIF3HO15372 352 aaKnown RBP eCLIP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 GYG2O15488 501 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 NDUFS3O75489 264 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 KRT4P19013 534 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 TGM2P21980 687 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 ST8SIA6P61647 398 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 PALB2Q86YC2 1186 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 PHF13Q86YI8 300 aaPredicted RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 HSFY1Q96LI6 401 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 C10orf88Q9H8K7 445 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 SDR42E2A6NKP2 422 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 CAND2O75155 1236 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 ENDOD1O94919 500 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 TTC4O95801 387 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 SNCBQ16143 134 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 TFAP2DQ7Z6R9 452 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 LINC00523Q86TU6 105 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 C1orf127Q8N9H9 656 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 ANKRD52Q8NB46 1076 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 ULK4Q96C45 1275 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 DEFB118Q96PH6 123 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 PPP1R2P1Q96PQ5 205 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 SUDS3Q9H7L9 328 aaPredicted RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 TLR8Q9NR97 1041 aaKnown RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 SMPD4Q9NXE4 827 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 RRN3Q9NYV6 651 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 MARCOQ9UEW3 520 aaPredicted RBP11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 RPTORQ8N122 1335 aa11.02□□□□□ -0.65
MTHFD2-201ENST00000394053 HAUS5O94927 633 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 GFAPP14136 432 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 KDELR1P24390 212 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 YWHAQP27348 245 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 KIF19Q2TAC6 998 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ACAD11Q709F0 780 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 APTXQ7Z2E3 356 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ALG3Q92685 438 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 TTYH3Q9C0H2 523 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 HACD3Q9P035 362 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 AFF4Q9UHB7 1163 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 E2F5Q15329 346 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 KCNA10Q16322 511 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 PPP1R26Q5T8A7 1209 aaPredicted RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 FAM183BPQ6ZVS7 135 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 RIBC1Q8N443 379 aaPredicted RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 COLGALT1Q8NBJ5 622 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 LRGUKQ96M69 825 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 PDZD7Q9H5P4 517 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 DYRK4Q9NR20 520 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 TUBGCP4Q9UGJ1 667 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 SLC39A10Q9ULF5 831 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 DNAJC6O75061 913 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 NOS2P35228 1153 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 IKBKEQ14164 716 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 KRT33BQ14525 404 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 TRIM68Q6AZZ1 485 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 KCNT2Q6UVM3 1135 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 SPATA21Q7Z572 469 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 BLOC1S5Q8TDH9 187 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 PPWD1Q96BP3 646 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 TASP1Q9H6P5 420 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ENTPD7Q9NQZ7 604 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 RBM22Q9NW64 420 aaKnown RBP eCLIP11.01□□□□□ -0.652e-7■■■■■ 31.5
MTHFD2-201ENST00000394053 ZMYM2Q9UBW7 1377 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 GOLGA4Q13439 2230 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 A0A1B0GUA9 196 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 BTNL10A8MVZ5 291 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 STK25O00506 426 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 PECAM1P16284 738 aaPredicted RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 ZNF143P52747 638 aaPredicted RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 EPHB3P54753 998 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 TBX4P57082 545 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 CRHR2Q13324 411 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 CCL14Q16627 93 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 NOMO2Q5JPE7 1267 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 HIPK4Q8NE63 616 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 NAT9Q9BTE0 207 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 GPR63Q9BZJ6 419 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 FAM96AQ9H5X1 160 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 FGFR1OP2Q9NVK5 253 aa11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 AAR2Q9Y312 384 aaKnown RBP11.01□□□□□ -0.65
MTHFD2-201ENST00000394053 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
MTHFD2-201ENST00000394053 CA12O43570 354 aa11□□□□□ -0.65
MTHFD2-201ENST00000394053 TSPAN1O60635 241 aa11□□□□□ -0.65
MTHFD2-201ENST00000394053 APOC2P02655 101 aa11□□□□□ -0.65
MTHFD2-201ENST00000394053 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.653e-8■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms