RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 LRRC74BQ6ZQY2 392 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CLPTM1LQ96KA5 538 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 OPHN1O60890 802 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CD48P09326 243 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 RPL22P35268 128 aaKnown RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 EPHB1P54762 984 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CDCA2Q69YH5 1023 aaPredicted RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 JADE1Q6IE81 842 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 RINLQ6ZS11 566 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 GPR142Q7Z601 462 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 UNC45BQ8IWX7 931 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 EXOC8Q8IYI6 725 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 CCDC110Q8TBZ0 833 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 TFAP2BQ92481 460 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 PIDD1Q9HB75 910 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 GBA2Q9HCG7 927 aaPredicted RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 RAB6BQ9NRW1 208 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 C2CD2Q9Y426 696 aa11.28□□□□□ -0.6
BRF1-204ENST00000392557 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
BRF1-204ENST00000392557 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 TMEM191CA6NGB0 347 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 TYROBPO43914 113 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 GNAZP19086 355 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 POLR2BP30876 1174 aaKnown RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 SERPINB4P48594 390 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 PAPOLAP51003 745 aaKnown RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 GTF2A2P52657 109 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 OGDHQ02218 1023 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 KIAA0319LQ8IZA0 1049 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.27□□□□□ -0.6
BRF1-204ENST00000392557 WDR60Q8WVS4 1066 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 CPT1BQ92523 772 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 NMUR2Q9GZQ4 415 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 CYP4F11Q9HBI6 524 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.6
BRF1-204ENST00000392557 WASF2Q9Y6W5 498 aa11.27□□□□□ -0.6
BRF1-204ENST00000392557 CLUHO75153 1309 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 PSMG1O95456 288 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 APRTP07741 180 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 SLC26A2P50443 739 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 SLC34A1Q06495 639 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 KRT81Q14533 505 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 NPNTQ6UXI9 565 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 NUDCD3Q8IVD9 361 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 TUBB6Q9BUF5 446 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 MAF1Q9H063 256 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 IFT122Q9HBG6 1241 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 LRRC42Q9Y546 428 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 IGKV6-21A0A0C4DH24 114 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 TBX10O75333 385 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 MMP8P22894 467 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 CACNA2D1P54289 1103 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 CDH6P55285 790 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 CHI3L2Q15782 390 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 GLRA4Q5JXX5 417 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 MROH9Q5TGP6 573 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 TSHZ1Q6ZSZ6 1077 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 PRPF39Q86UA1 669 aaKnown RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 NETO2Q8NC67 525 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 OXNAD1Q96HP4 312 aaPredicted RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 FZD8Q9H461 694 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 ZNF395Q9H8N7 513 aaPredicted RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 RRAGCQ9HB90 399 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 SAR1AQ9NR31 198 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 PCMTD2Q9NV79 361 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 PRMT7Q9NVM4 692 aaPredicted RBP11.27□□□□□ -0.61
BRF1-204ENST00000392557 HES2Q9Y543 173 aa11.27□□□□□ -0.61
BRF1-204ENST00000392557 E2F8A0AVK6 867 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 MEI4A8MW99 385 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 MAGEB2O15479 319 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 FAM189A1O60320 539 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SMPD1P17405 629 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 NUMBP49757 651 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 CDK16Q00536 496 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 PHF13Q86YI8 300 aaPredicted RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 C2orf69Q8N8R5 385 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 TAS2R1Q9NYW7 299 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 CCDC160A6NGH7 325 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 E7ENQ6 273 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 KRT37O76014 449 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 TMEM63AO94886 807 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SNAI1O95863 264 aaPredicted RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 KRT7P08729 469 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 CDKN2BP42772 138 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 AQP5P55064 265 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 PTP4A2Q12974 167 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 GRIK3Q13003 919 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SURF1Q15526 300 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms