RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 VAV1P15498 845 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 CTCFP49711 727 aaPredicted RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 OXCT1P55809 520 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 IL2P60568 153 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 LRRC36Q1X8D7 754 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 SEL1L3Q68CR1 1132 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 AMER2Q8N7J2 671 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF473Q8WTR7 871 aaKnown RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 C9orf16Q9BUW7 83 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 DCP1AQ9NPI6 582 aaPredicted RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 RPS6P62753 249 aaKnown RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 TRIM32Q13049 653 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 LPCAT2Q7L5N7 544 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 ERP27Q96DN0 273 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 ADGRE3Q9BY15 652 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 LSP1P33241 339 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 LRRC14Q15048 493 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 EIF2S3LQ2VIR3 472 aaKnown RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 DAPK2Q9UIK4 370 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 ZNF232Q9UNY5 417 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 ANKMY2Q8IV38 441 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 CHD1O14646 1710 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 PP2D1A8MPX8 630 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 F5H6K3 240 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 OGNP20774 298 aaKnown RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 PIK3CGP48736 1102 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 MTTPP55157 894 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 KLRC3Q07444 240 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 MYLPFQ96A32 169 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 EFHD2Q96C19 240 aaPredicted RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 SPATA5L1Q9BVQ7 753 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 PFDN2Q9UHV9 154 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 FGRP09769 529 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 PDIA6Q15084 440 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 EFHC1Q5JVL4 640 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 CHSY1Q86X52 802 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 SCUBE1Q8IWY4 988 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 EEF1AKMT1Q8WVE0 214 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 C6orf62Q9GZU0 229 aaPredicted RBP15.16■□□□□ 0.02
CCDC50-201ENST00000392455 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
CCDC50-201ENST00000392455 G3V2T6 193 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 GLRA3O75311 464 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MARCH10Q8NA82 808 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SSNA1O43805 119 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SMNDC1O75940 238 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 ENO2P09104 434 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SMIM11AP58511 58 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MYBPC2Q14324 1141 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 C3orf62Q6ZUJ4 267 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MIEF2Q96C03 454 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 FAM58BPP0C7Q3 252 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 GUF1Q8N442 669 aaKnown RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MAGEB2O15479 319 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 CHN1P15882 459 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 FGFR4P22455 802 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MZF1P28698 734 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 TMEM132DQ14C87 1099 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SYTL1Q8IYJ3 562 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 DDX47Q9H0S4 455 aaKnown RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 CYP2C8P10632 490 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 PNPLA4P41247 253 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 ATP6AP1LQ52LC2 224 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 IL31Q6EBC2 164 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 RNF149Q8NC42 400 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 FRMD6Q96NE9 622 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 IFRD1O00458 451 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 TADA2AO75478 443 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 PPIL6Q8IXY8 311 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 NCKIPSDQ9NZQ3 722 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 F8VZ95 297 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 EEF2KO00418 725 aaKnown RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 C21orf59P57076 290 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 PEX6Q13608 980 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 BHLHB9Q6PI77 547 aa15.15■□□□□ 0.02
CCDC50-201ENST00000392455 RPRD1AQ96P16 312 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 CINPQ9BW66 212 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
CCDC50-201ENST00000392455 ESYT3A0FGR9 886 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 PRRG1O14668 218 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 TDP2O95551 362 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 ITGB6P18564 788 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 CLK3P49761 638 aaKnown RBP15.14■□□□□ 0.01
CCDC50-201ENST00000392455 MTMR2Q13614 643 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 VN1R5Q7Z5H4 357 aa15.14■□□□□ 0.01
CCDC50-201ENST00000392455 CACNA1FO60840 1977 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms