RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 SLC9A1P19634 815 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 DRD1P21728 446 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 PON1P27169 355 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 HOXA6P31267 233 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 ATP5C1P36542 298 aaKnown RBP11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 RPL34P49207 117 aaKnown RBP11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 NR1H3Q13133 447 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 DHCR24Q15392 516 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 STILQ15468 1287 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 ENOSF1Q7L5Y1 443 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 ASCL5Q7RTU5 278 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 RBBP8NLQ8NC74 664 aaPredicted RBP11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 UBA3Q8TBC4 463 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 P2RY13Q9BPV8 354 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 CRACR2AQ9BSW2 395 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 FAM126AQ9BYI3 521 aaPredicted RBP11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 LAMA1P25391 3075 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 ABCA7Q8IZY2 2146 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 DCHS1Q96JQ0 3298 aa11.98□□□□□ -0.49
IGHV4-28-201ENST00000390612 PRR23AA6NEV1 266 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 BECN2A8MW95 431 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 K7ESF4 209 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 ZBED1O96006 694 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 CALCAP01258 141 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 EIF2DP41214 584 aaKnown RBP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 CXCL12P48061 93 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 CCR3P51677 355 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 TKTL1P51854 596 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 SLC8A3P57103 927 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 SATB1Q01826 763 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 CSTF1Q05048 431 aaKnown RBP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 GRSF1Q12849 480 aaKnown RBP eCLIP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 MEA1Q16626 185 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 MAN2A1Q16706 1144 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 EXOC3L4Q17RC7 722 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 FBXO43Q4G163 708 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 PMF1Q6P1K2 205 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 GJB7Q6PEY0 223 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 TSSK4Q6SA08 328 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 Q6ZNB5 142 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 BBS7Q8IWZ6 715 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 PHTF2Q8N3S3 785 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 CD101Q93033 1021 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 FAM81BQ96LP2 452 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 ULBP1Q9BZM6 244 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 SIX2Q9NPC8 291 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 SAMSN1Q9NSI8 373 aaKnown RBP11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 ZSCAN32Q9NX65 697 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 HESX1Q9UBX0 185 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 NAGPAQ9UK23 515 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 NUDT5Q9UKK9 219 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 PCDHGA2Q9Y5H1 932 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 R4GN57 208 aa11.97□□□□□ -0.49
IGHV4-28-201ENST00000390612 SCAMP3O14828 347 aaKnown RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 MDM4O15151 490 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 HOXC11O43248 304 aaPredicted RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 STC2O76061 302 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 RALAP11233 206 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 BRD2P25440 801 aaKnown RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 GPD2P43304 727 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 MTIF2P46199 727 aaKnown RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 APBA1Q02410 837 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 MESP2Q0VG99 397 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 C10orf120Q5SQS8 335 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 LY6G5CQ5SRR4 150 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 FAM114A1Q8IWE2 563 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 ETFBKMTQ8IXQ9 262 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 SUMF1Q8NBK3 374 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 TTC16Q8NEE8 873 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 SHC3Q92529 594 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 NDRG1Q92597 394 aaKnown RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 EXOC4Q96A65 974 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 HSFY1Q96LI6 401 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 CDK5RAP1Q96SZ6 601 aaKnown RBP11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 NDST4Q9H3R1 872 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 APEX2Q9UBZ4 518 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.49
IGHV4-28-201ENST00000390612 YJEFN3A6XGL0 299 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 E7ENQ6 273 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 GOLGA6L22H0YM25 854 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 K7EQS6 105 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 GFRA3O60609 400 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 ADH1CP00326 375 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 KLKB1P03952 638 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 HOXC13P31276 330 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 SLC6A11P48066 632 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 NRLP54845 237 aa11.95□□□□□ -0.5
IGHV4-28-201ENST00000390612 MFAP3P55082 362 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms