RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TCHHL1Q5QJ38 904 aaPredicted RBP15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 ANKRD22Q5VYY1 191 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 KAZNQ674X7 775 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 DENND5BQ6ZUT9 1274 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 AMIGO2Q86SJ2 522 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 CRLF3Q8IUI8 442 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 PALM2Q8IXS6 379 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 CCDC33Q8N5R6 958 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 GMLQ99445 158 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 C20orf27Q9GZN8 174 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 SIRPGQ9P1W8 387 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 FADS3Q9Y5Q0 445 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 PI4K2BG5E9Z4 385 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ZBTB39O15060 712 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ADCY6O43306 1168 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 CALCAP01258 141 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 PHKA2P46019 1235 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 FKBP1AP62942 108 aaKnown RBP15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 WASHC5Q12768 1159 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ALCAMQ13740 583 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 OASLQ15646 514 aaKnown RBP15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 CHI3L2Q15782 390 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 TMEM110Q86TL2 294 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 SEMA4DQ92854 862 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 PCDH9Q9HC56 1237 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 FBXO28Q9NVF7 368 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF70Q9UC06 446 aaPredicted RBP15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ITGA11Q9UKX5 1188 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 A0A0B4J269 797 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 E7ESA3 106 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 COPEO14579 308 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ADAM23O75077 832 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 MXI1P50539 228 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 TUBB3Q13509 450 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ANKDD1AQ495B1 522 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 C2CD6Q53TS8 623 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 ODR4Q5SWX8 454 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 EFCAB3Q8N7B9 438 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 SLC44A1Q8WWI5 657 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 TMIGD2Q96BF3 282 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 STRA6Q9BX79 667 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 KLHL11Q9NVR0 708 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 SELENONQ9NZV5 590 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
VPS9D1-201ENST00000389386 TISP43B9A030 160 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 CHMP2AO43633 222 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 RXRGP48443 463 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 DGKZQ13574 1117 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 BCL2A1Q16548 175 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 TICAM1Q8IUC6 712 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 FBXW8Q8N3Y1 598 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 CPA5Q8WXQ8 436 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 GLT8D2Q9H1C3 349 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 CYP4F11Q9HBI6 524 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 DOLKQ9UPQ8 538 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 PLLPQ9Y342 182 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 A0A1B0GTW7 788 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 CCDC195A0A1B0GUA6 201 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 FUOMA2VDF0 154 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 PMM2O15305 246 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 MSH4O15457 936 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 ENTPD3O75355 529 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 KLHL2O95198 593 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 IFNB1P01574 187 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 TFPTP0C1Z6 253 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF23P17027 643 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF76P36508 570 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 ALDH3B2P48448 385 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 ATP13A4Q4VNC1 1196 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 C6orf52Q5T4I8 152 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 KCTD17Q8N5Z5 321 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 CPT1BQ92523 772 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 HSD17B14Q9BPX1 270 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 TMEM121Q9BTD3 319 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 USTQ9Y2C2 406 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 COQ6Q9Y2Z9 468 aa15.19■□□□□ 0.02
VPS9D1-201ENST00000389386 FBXO21O94952 628 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 KCTD21Q4G0X4 260 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 LPCAT2Q7L5N7 544 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 PCGF5Q86SE9 256 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 PPIL6Q8IXY8 311 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 DEFB107AQ8IZN7 70 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 NKD2Q969F2 451 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 GMCL1Q96IK5 515 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 SLC2A11Q9BYW1 496 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 KLC2Q9H0B6 622 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms