RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SIX4Q9UIU6 781 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 MYOFQ9NZM1 2061 aa10.25□□□□□ -0.77
IFT88-203ENST00000389373 METTL12A8MUP2 240 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 KCNJ18B7U540 433 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 PYCARD-AS1I3L0S3 204 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 TLX3O43711 291 aaPredicted RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 LDHAP00338 332 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 ACADMP11310 421 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 TYRP14679 529 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 GNL1P36915 607 aaPredicted RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 UBA7P41226 1012 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 CACNA2D1P54289 1103 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 HMGN5P82970 282 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 IL9RQ01113 521 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 STARD3Q14849 445 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 SMAD1Q15797 465 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 FUT11Q495W5 492 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 DBX2Q6ZNG2 339 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 DPH6Q7L8W6 267 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 DYMQ7RTS9 669 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 FAM124AQ86V42 546 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 SFR1Q86XK3 245 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 SYCP3Q8IZU3 236 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 NUP93Q8N1F7 819 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 PDZD8Q8NEN9 1154 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 ENGASEQ8NFI3 743 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 CADM4Q8NFZ8 388 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 OR6B3Q8NGW1 331 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 CEP295NLQ96MC4 621 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 GABRG3Q99928 467 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 MRPL45Q9BRJ2 306 aaKnown RBP10.24□□□□□ -0.77
IFT88-203ENST00000389373 TRIM9Q9C026 710 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 ZNF518BQ9C0D4 1074 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 CD248Q9HCU0 757 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 ITM2CQ9NQX7 267 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 BLOC1S4Q9NUP1 217 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 GMIPQ9P107 970 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 LIMCH1Q9UPQ0 1083 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 PCDHGB2Q9Y5G2 931 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 STON1Q9Y6Q2 735 aa10.24□□□□□ -0.77
IFT88-203ENST00000389373 ASXL3Q9C0F0 2248 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 E9PAM4 449 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 PRPF6O94906 941 aaKnown RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 DKK1O94907 266 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 RTN3O95197 1032 aaPredicted RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 TNNC2P02585 160 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 WARSP23381 471 aaKnown RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 OXTRP30559 389 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 DDIT3P35638 169 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 DGKGP49619 791 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 TPMTP51580 245 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 KCNA1Q09470 495 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 KIF19Q2TAC6 998 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 ZNF720Q7Z2F6 126 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 GPR155Q7Z3F1 870 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 TMPRSS6Q8IU80 811 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 LSM14AQ8ND56 463 aaKnown RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 SCAMP5Q8TAC9 235 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 CXorf38Q8TB03 319 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 RAD54LQ92698 747 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 PRCCQ92733 491 aaPredicted RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 SIPA1Q96FS4 1042 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 ACCSQ96QU6 501 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 LLPHQ9BRT6 129 aaKnown RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 MED10Q9BTT4 135 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 MRPL44Q9H9J2 332 aaKnown RBP10.23□□□□□ -0.77
IFT88-203ENST00000389373 PLK2Q9NYY3 685 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 FTSJ1Q9UET6 329 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 EXOC7Q9UPT5 735 aa10.23□□□□□ -0.77
IFT88-203ENST00000389373 MYO18AQ92614 2054 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 BPTFQ12830 3046 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 GFRA2O00451 464 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 SYNCRIPO60506 623 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 GCNT3O95395 438 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 PTPN1P18031 435 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 GRK6P43250 576 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 CXADRP78310 365 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 CCDC173Q0VFZ6 552 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 TEAD4Q15561 434 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 LAYNQ6UX15 382 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 TMPRSS12Q86WS5 348 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 BAP1Q92560 729 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 LARP4BQ92615 738 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 KCNK16Q96T55 309 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 B3GNT5Q9BYG0 378 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 MKRN2Q9H000 416 aaKnown RBP10.22□□□□□ -0.77
IFT88-203ENST00000389373 DPEP3Q9H4B8 488 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 TMEM30AQ9NV96 361 aa10.22□□□□□ -0.77
IFT88-203ENST00000389373 USP36Q9P275 1121 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms