RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 FAM228BP0C875 321 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 MYBP10242 640 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PRLRP16471 622 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 TCP1P17987 556 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CYP11B2P19099 503 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SLC9A1P19634 815 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 KLRC1P26715 233 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 EPS15P42566 896 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SELENOPP49908 381 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CASP5P51878 434 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SLC12A3P55017 1021 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 NFYCQ13952 458 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PCOLCEQ15113 449 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ASIC2Q16515 512 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CDC37Q16543 378 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 USH1GQ495M9 461 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SLC9C1Q4G0N8 1177 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PRR16Q569H4 304 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 HAUS3Q68CZ6 603 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CDCA2Q69YH5 1023 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 TTC19Q6DKK2 380 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 APOBEC3HQ6NTF7 200 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZNF585AQ6P3V2 769 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SLC30A10Q6XR72 485 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 USP30Q70CQ3 517 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZNF572Q7Z3I7 529 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 FAM133AQ8N9E0 248 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 Q8TCH9 128 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SCFD1Q8WVM8 642 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 IFT81Q8WYA0 676 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FOXRED1Q96CU9 486 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CRAMP1Q96RY5 1269 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ANO3Q9BYT9 981 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 EDEM3Q9BZQ6 932 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 COA1Q9GZY4 146 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 NT5C3AQ9H0P0 336 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 OR10A2Q9H208 303 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 KCTD10Q9H3F6 313 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 DNAJC18Q9H819 358 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CEP72Q9P209 647 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 B4GALT6Q9UBX8 382 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SWAP70Q9UH65 585 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FEZ2Q9UHY8 353 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 HDAC9Q9UKV0 1011 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FAM184BQ9ULE4 1060 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZFR2Q9UPR6 939 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 RRP15Q9Y3B9 282 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 ATP6V0A2Q9Y487 856 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ATAD5Q96QE3 1844 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SMCHD1A6NHR9 2005 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 KDM3AQ9Y4C1 1321 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 LTBP1Q14766 1721 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 GREB1LQ9C091 1923 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 GOLGA6CA6NDK9 693 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 ZSCAN5CA6NGD5 496 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 RSPH10B2B2RC85 870 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 MYO1CO00159 1063 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 DVL2O14641 736 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 MEIS2O14770 477 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CETN3O15182 167 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CLIC2O15247 247 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 FOXS1O43638 330 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CDC14BO60729 498 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 IVLP07476 585 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 RSPH10BP0C881 870 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 GOLGA6DP0CG33 693 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 GCFC2P16383 781 aaKnown RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 NR2F2P24468 414 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 HOXA13P31271 388 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 HOXD13P35453 343 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CARSP49589 748 aaKnown RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 GUCY2FP51841 1108 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 RBM5P52756 815 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMC6-202ENST00000381272 GUCY2DQ02846 1103 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CYP4A11Q02928 519 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 ROM1Q03395 351 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 KLHL30Q0D2K2 578 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 IKQ13123 557 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 GIT2Q14161 759 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 SEPT2Q15019 361 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 TRADDQ15628 312 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 NAB2Q15742 525 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 KIAA0753Q2KHM9 967 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 FAM153CQ494X1 144 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CERKLQ49MI3 558 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 DNAJC21Q5F1R6 531 aaKnown RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 HYIQ5T013 277 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 GPATCH4Q5T3I0 446 aaKnown RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 C8orf74Q6P047 294 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 GJB7Q6PEY0 223 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 ZNF571Q7Z3V5 609 aaPredicted RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 SRLQ86TD4 932 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 SFR1Q86XK3 245 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CATSPER3Q86XQ3 398 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 KLHL7Q8IXQ5 586 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 RNF10Q8N5U6 811 aaKnown RBP4.01□□□□□ -1.77
SMC6-202ENST00000381272 KIAA1958Q8N8K9 716 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 FAM76AQ8TAV0 307 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 CYP2W1Q8TAV3 490 aa4.01□□□□□ -1.77
SMC6-202ENST00000381272 TEKT1Q969V4 418 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms