RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 C1orf131Q8NDD1 294 aaKnown RBP20.34■□□□□ 0.85
GTF3A-201ENST00000381140 SLC20A1Q8WUM9 679 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 PBXIP1Q96AQ6 731 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 CYLDQ9NQC7 956 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 HEBP1Q9NRV9 189 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 RASAL2Q9UJF2 1139 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 WNT6Q9Y6F9 365 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 A0A1W2PQC6 194 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 KRBA1A5PL33 1030 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 YJEFN3A6XGL0 299 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 E5RJQ4 531 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 E7ENQ6 273 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 TPM3P06753 285 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 ACADSBP45954 432 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 IFNAR2P48551 515 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 DAOAP59103 153 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 TNK2Q07912 1038 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 EFEMP1Q12805 493 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 PDCLQ13371 301 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 MEA1Q16626 185 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 SLC44A4Q53GD3 710 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 SMYD5Q6GMV2 418 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 BHLHA9Q7RTU4 235 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 MIB1Q86YT6 1006 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 SCUBE3Q8IX30 993 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 WDTC1Q8N5D0 677 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 FLCNQ8NFG4 579 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 EPS8L1Q8TE68 723 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 EDEM1Q92611 657 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 DNASE1L2Q92874 299 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 DUS2Q9NX74 493 aaKnown RBP20.34■□□□□ 0.85
GTF3A-201ENST00000381140 CLIC5Q9NZA1 410 aa20.34■□□□□ 0.85
GTF3A-201ENST00000381140 FBXO21O94952 628 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 MMEP08473 750 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 KPNA1P52294 538 aaPredicted RBP20.33■□□□□ 0.84
GTF3A-201ENST00000381140 MLF2Q15773 248 aaPredicted RBP20.33■□□□□ 0.84
GTF3A-201ENST00000381140 BSPRYQ5W0U4 402 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 TPRG1Q6ZUI0 275 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 HFE2Q6ZVN8 426 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 TADA2BQ86TJ2 420 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 DDX42Q86XP3 938 aaKnown RBP eCLIP20.33■□□□□ 0.84
GTF3A-201ENST00000381140 GOLGA1Q92805 767 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 NOX5Q96PH1 765 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 SLC4A5Q9BY07 1137 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 LHX5Q9H2C1 402 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 EBF3Q9H4W6 596 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 SYNCQ9H7C4 482 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 GTSE1Q9NYZ3 720 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 TJP2Q9UDY2 1190 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 DNMT3LQ9UJW3 386 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 SH3BP1Q9Y3L3 701 aa20.33■□□□□ 0.84
GTF3A-201ENST00000381140 HMBSP08397 361 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 ARSAP15289 507 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 TMEM35BQ8NCS4 154 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 STK32AQ8WU08 396 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 RNF139Q8WU17 664 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 DDX1Q92499 740 aaKnown RBP20.32■□□□□ 0.84
GTF3A-201ENST00000381140 FAM149B1Q96BN6 582 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 PPP1R13BQ96KQ4 1090 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 ZFRQ96KR1 1074 aaKnown RBP20.32■□□□□ 0.84
GTF3A-201ENST00000381140 CPXM1Q96SM3 734 aa20.32■□□□□ 0.84
GTF3A-201ENST00000381140 NOCTQ9UK39 431 aaKnown RBP20.32■□□□□ 0.84
GTF3A-201ENST00000381140 GPR37L1O60883 481 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 LTFP02788 710 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 CD72P21854 359 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 SOX9P48436 509 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 SCML4Q8N228 414 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 IPO4Q8TEX9 1081 aaKnown RBP20.31■□□□□ 0.84
GTF3A-201ENST00000381140 IRGQQ8WZA9 623 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 WBP2Q969T9 261 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 CDK5RAP1Q96SZ6 601 aaKnown RBP20.31■□□□□ 0.84
GTF3A-201ENST00000381140 KLF16Q9BXK1 252 aaPredicted RBP20.31■□□□□ 0.84
GTF3A-201ENST00000381140 TBC1D17Q9HA65 648 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 SEPT11Q9NVA2 429 aaKnown RBP20.31■□□□□ 0.84
GTF3A-201ENST00000381140 MARCH2Q9P0N8 246 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 PIAS3Q9Y6X2 628 aa20.31■□□□□ 0.84
GTF3A-201ENST00000381140 ARNTLO00327 626 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 PAPSS1O43252 624 aaPredicted RBP20.3■□□□□ 0.84
GTF3A-201ENST00000381140 TCF3P15923 654 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 RPL34P49207 117 aaKnown RBP20.3■□□□□ 0.84
GTF3A-201ENST00000381140 CDR2Q01850 454 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 GOLGA8FQ08AF8 430 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 GOLGA8DPQ0D2H9 430 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 PDGFRLQ15198 375 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 ITPRIPL2Q3MIP1 535 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 NAA35Q5VZE5 725 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 TMEM110Q86TL2 294 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 OSCP1Q8WVF1 389 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 BAP1Q92560 729 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 SHDQ96IW2 340 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 FAM83CQ9BQN1 747 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 LRFN3Q9BTN0 628 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 LINC00597Q9H2U6 94 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 HPS4Q9NQG7 708 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 ABCC13Q9NSE7 274 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 STRIP2Q9ULQ0 834 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 F5P12259 2224 aa20.3■□□□□ 0.84
GTF3A-201ENST00000381140 SLC12A8A0AV02 714 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 LRRC53A6NM62 1247 aa20.29■□□□□ 0.84
GTF3A-201ENST00000381140 PRR33A8MZF0 331 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms