RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
GMDS-201ENST00000380805 CFAP69A5D8W1 941 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 ALOX15BO15296 676 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 SCNN1GP51170 649 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 CDR1P51861 262 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 MRPS5P82675 430 aaKnown RBP20.05■□□□□ 0.8
GMDS-201ENST00000380805 ROR1Q01973 937 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 CA9Q16790 459 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 SLC25A52Q3SY17 297 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 TTC19Q6DKK2 380 aaPredicted RBP20.05■□□□□ 0.8
GMDS-201ENST00000380805 SCYL2Q6P3W7 929 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 PCDH19Q8TAB3 1148 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 UHMK1Q8TAS1 419 aaKnown RBP20.05■□□□□ 0.8
GMDS-201ENST00000380805 UBN1Q9NPG3 1134 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 DNAJC17Q9NVM6 304 aaKnown RBP20.05■□□□□ 0.8
GMDS-201ENST00000380805 CDH9Q9ULB4 789 aa20.05■□□□□ 0.8
GMDS-201ENST00000380805 PATJQ8NI35 1801 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 TLDC2A0PJX2 215 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 E7ESA3 106 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 APOL1O14791 398 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 SKIP12755 728 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 ACAT1P24752 427 aaKnown RBP20.04■□□□□ 0.8
GMDS-201ENST00000380805 L1CAMP32004 1257 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 RDXP35241 583 aaKnown RBP20.04■□□□□ 0.8
GMDS-201ENST00000380805 IFI35P80217 286 aaPredicted RBP20.04■□□□□ 0.8
GMDS-201ENST00000380805 ADIGQ0VDE8 80 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 ITGA7Q13683 1181 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 BCAS4Q8TDM0 211 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.04■□□□□ 0.8
GMDS-201ENST00000380805 SLC2A13Q96QE2 648 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 SYT15Q9BQS2 421 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 PRDM16Q9HAZ2 1276 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 MTMR10Q9NXD2 777 aa20.04■□□□□ 0.8
GMDS-201ENST00000380805 RCOR3Q9P2K3 495 aaPredicted RBP20.04■□□□□ 0.8
GMDS-201ENST00000380805 PTPRDP23468 1912 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 BEST1O76090 585 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 CYP11A1P05108 521 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 INHAP05111 366 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 FAM200BP0CF97 657 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 GHRP10912 638 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 ATP5DP30049 168 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 GRIK3Q13003 919 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 LONRF1Q17RB8 773 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 MDH1BQ5I0G3 518 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 OTUD1Q5VV17 481 aaPredicted RBP20.03■□□□□ 0.8
GMDS-201ENST00000380805 FBXO46Q6PJ61 603 aaPredicted RBP20.03■□□□□ 0.8
GMDS-201ENST00000380805 CENPUQ71F23 418 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 RNF180Q86T96 592 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 RIBC1Q8N443 379 aaPredicted RBP20.03■□□□□ 0.8
GMDS-201ENST00000380805 PGBD4Q96DM1 585 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 C9orf72Q96LT7 481 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 USP29Q9HBJ7 922 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 SAYSD1Q9NPB0 183 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 GPATCH2LQ9NWQ4 482 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 CACNG4Q9UBN1 327 aa20.03■□□□□ 0.8
GMDS-201ENST00000380805 BCLAF3A2AJT9 711 aaKnown RBP20.02■□□□□ 0.8
GMDS-201ENST00000380805 CLDN5O00501 218 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 FBXO21O94952 628 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 NOS2P35228 1153 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 ACLYP53396 1101 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 RAB41Q5JT25 222 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 NPNTQ6UXI9 565 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 TAOK1Q7L7X3 1001 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 ZNF598Q86UK7 904 aaKnown RBP20.02■□□□□ 0.8
GMDS-201ENST00000380805 FAM35AQ86V20 835 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 UROC1Q96N76 676 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 NPY6RQ99463 290 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 NRDE2Q9H7Z3 1164 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 AP4E1Q9UPM8 1137 aa20.02■□□□□ 0.8
GMDS-201ENST00000380805 A0A087WUV0 522 aaPredicted RBP20.02■□□□□ 0.79
GMDS-201ENST00000380805 MOXD2PA6NHM9 499 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 TRAPPC3O43617 180 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 CDH16O75309 829 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 ZFXP17010 805 aaPredicted RBP20.02■□□□□ 0.79
GMDS-201ENST00000380805 PCSK1P29120 753 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 SLCO1A2P46721 670 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 BCAR1P56945 870 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 YWHAZP63104 245 aaKnown RBP20.02■□□□□ 0.79
GMDS-201ENST00000380805 XRCC4Q13426 336 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 RASA2Q15283 850 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 HIF1AQ16665 826 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 TIGD5Q53EQ6 642 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 CD300LGQ6UXG3 332 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 DSTYKQ6XUX3 929 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 TDRPQ86YL5 185 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 DEFB106AQ8N104 65 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 FAM71DQ8N9W8 422 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 MYCBPAPQ8TBZ2 947 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 CCDC77Q9BR77 488 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 C10orf88Q9H8K7 445 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 PPCSQ9HAB8 311 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 KRT82Q9NSB4 513 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 USP3Q9Y6I4 520 aa20.02■□□□□ 0.79
GMDS-201ENST00000380805 NLRC5Q86WI3 1866 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 SMIM23A6NLE4 172 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 C9IYK1 514 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 M0QZQ0 153 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 MYCP01106 439 aaPredicted RBP20.01■□□□□ 0.79
GMDS-201ENST00000380805 ODC1P11926 461 aa20.01■□□□□ 0.79
GMDS-201ENST00000380805 CYP2F1P24903 491 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms