RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 GDF6Q6KF10 455 aaPredicted RBP24.06■■□□□ 1.44
VPS16-201ENST00000380443 OSTM1Q86WC4 334 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 ZBED8Q8IZ13 594 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 ATP11CQ8NB49 1132 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 FAM169AQ9Y6X4 670 aa24.06■■□□□ 1.44
VPS16-201ENST00000380443 H7C0C1 242 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 CHADO15335 359 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 NPR3P17342 541 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 CTGFP29279 349 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 ATP5OP48047 213 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 PRMT2P55345 433 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 RNASELQ05823 741 aaKnown RBP24.05■■□□□ 1.44
VPS16-201ENST00000380443 MGAT3Q09327 533 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 CXCL17Q6UXB2 119 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 CPLX4Q7Z7G2 160 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 PQLC3Q8N755 202 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 DAB1O75553 588 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 ATP2A2P16615 1042 aaKnown RBP24.05■■□□□ 1.44
VPS16-201ENST00000380443 L1CAMP32004 1257 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 ZNF618Q5T7W0 954 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 GKAP1Q5VSY0 366 aaPredicted RBP24.05■■□□□ 1.44
VPS16-201ENST00000380443 CDKL3Q8IVW4 592 aaPredicted RBP24.05■■□□□ 1.44
VPS16-201ENST00000380443 FUKQ8N0W3 1084 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 PCDH19Q8TAB3 1148 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 PYROXD1Q8WU10 500 aa24.05■■□□□ 1.44
VPS16-201ENST00000380443 ZNF317Q96PQ6 595 aaPredicted RBP24.05■■□□□ 1.44
VPS16-201ENST00000380443 ZNF623O75123 536 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 ZNF189O75820 626 aaPredicted RBP24.04■■□□□ 1.44
VPS16-201ENST00000380443 KIAA0754O94854 1291 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 FBXO21O94952 628 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 DRD4P21917 467 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 SLC18A1P54219 525 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 SLC25A52Q3SY17 297 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 ZC3H12AQ5D1E8 599 aaKnown RBP24.04■■□□□ 1.44
VPS16-201ENST00000380443 BZW1Q7L1Q6 419 aaKnown RBP24.04■■□□□ 1.44
VPS16-201ENST00000380443 PIGZQ86VD9 579 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 TRIB2Q92519 343 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 MAML1Q92585 1016 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 SENP8Q96LD8 212 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 LPIN3Q9BQK8 851 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 NSRP1Q9H0G5 558 aaKnown RBP24.04■■□□□ 1.44
VPS16-201ENST00000380443 NRDE2Q9H7Z3 1164 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 VPS37BQ9H9H4 285 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 USP29Q9HBJ7 922 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 RNF19AQ9NV58 838 aa24.04■■□□□ 1.44
VPS16-201ENST00000380443 HCRTO43612 131 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 CHRNA1P02708 482 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 NOS2P35228 1153 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 RAB6CQ53S08 254 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 CCDC13Q8IYE1 715 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 RAB6CQ9H0N0 254 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 LRRC4Q9HBW1 653 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 XPO7Q9UIA9 1087 aaKnown RBP24.03■■□□□ 1.44
VPS16-201ENST00000380443 AP4E1Q9UPM8 1137 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 TMEM120BA0PK00 339 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 MYO1CO00159 1063 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 SPAG6O75602 509 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 BRAFP15056 766 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 CYP2F1P24903 491 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 MRPS5P82675 430 aaKnown RBP24.03■■□□□ 1.44
VPS16-201ENST00000380443 KLHL38Q2WGJ6 581 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 WSCD1Q658N2 575 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 C1orf228Q6PIY5 440 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 VSTM1Q6UX27 236 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 NPNTQ6UXI9 565 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 ARHGEF18Q6ZSZ5 1173 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 ZFP42Q96MM3 310 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 STAP1Q9ULZ2 295 aa24.03■■□□□ 1.44
VPS16-201ENST00000380443 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.03■■□□□ 1.44
VPS16-201ENST00000380443 ADAMTS4O75173 837 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 FAM200BP0CF97 657 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 SKIP12755 728 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 CST5P28325 142 aaPredicted RBP24.02■■□□□ 1.44
VPS16-201ENST00000380443 TKTP29401 623 aaKnown RBP24.02■■□□□ 1.44
VPS16-201ENST00000380443 MAGEA6P43360 314 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 FLT3LGP49771 235 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 YWHAZP63104 245 aaKnown RBP24.02■■□□□ 1.44
VPS16-201ENST00000380443 CAP1Q01518 475 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 CCDC38Q502W7 563 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 EFHC2Q5JST6 749 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 FBXO46Q6PJ61 603 aaPredicted RBP24.02■■□□□ 1.44
VPS16-201ENST00000380443 ZC3H18Q86VM9 953 aaKnown RBP24.02■■□□□ 1.44
VPS16-201ENST00000380443 CACNA2D3Q8IZS8 1091 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 GSTCDQ8NEC7 633 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 NT5C3BQ969T7 300 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 SRRDQ9UH36 339 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 CDH9Q9ULB4 789 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 PTCH2Q9Y6C5 1203 aa24.02■■□□□ 1.44
VPS16-201ENST00000380443 ZBED1O96006 694 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 BASP1P80723 227 aaKnown RBP24.01■■□□□ 1.43
VPS16-201ENST00000380443 KCNJ11Q14654 390 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 CA9Q16790 459 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 ANKRD22Q5VYY1 191 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 KLHDC9Q8NEP7 349 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 CLEC4CQ8WTT0 213 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 SGSM3Q96HU1 749 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 MCOLN1Q9GZU1 580 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 DHX35Q9H5Z1 703 aaKnown RBP24.01■■□□□ 1.43
VPS16-201ENST00000380443 GPATCH2LQ9NWQ4 482 aa24.01■■□□□ 1.43
VPS16-201ENST00000380443 NKIRAS1Q9NYS0 192 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms