RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RHBDD1Q8TEB9 315 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 AP1M1Q9BXS5 423 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ZMYND12Q9H0C1 365 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ATP13A1Q9HD20 1204 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PDLIM7Q9NR12 457 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 FAM53CQ9NYF3 392 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 LAMA4Q16363 1823 aa6.8□□□□□ -1.32
NEDD9-202ENST00000379446 ADGRA3Q8IWK6 1321 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 A8MX80 341 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 NRP1O14786 923 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SMIM24O75264 130 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 HLA-DRAP01903 254 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ACADSBP45954 432 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TKTL1P51854 596 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 DEFB103AP81534 67 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TFF2Q03403 129 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 AP1B1Q10567 949 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 CUL1Q13616 776 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 RAPH1Q70E73 1250 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 KIAA2013Q8IYS2 634 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 CACNA2D3Q8IZS8 1091 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ATPAF2Q8N5M1 289 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ARMC2Q8NEN0 867 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 PHOSPHO2Q8TCD6 241 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SPPL2BQ8TCT7 592 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 BPIFB1Q8TDL5 484 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SGIP1Q9BQI5 828 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TRIM54Q9BYV2 358 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 RBM12Q9NTZ6 932 aaKnown RBP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ARHGAP20Q9P2F6 1191 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 GPN3Q9UHW5 284 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 GPSM3Q9Y4H4 160 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 BRWD1Q9NSI6 2320 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ANO9A1A5B4 782 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 LRRC10BA6NIK2 292 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 F8VP50 259 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 EIF3HO15372 352 aaKnown RBP eCLIP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 KLRC4O43908 158 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 CYBAP13498 195 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 RANBP1P43487 201 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 EPHB4P54760 987 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SESN3P58005 492 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 XRCC4Q13426 336 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 EOGTQ5NDL2 527 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 FRA10AC1Q70Z53 315 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 DENND1CQ8IV53 801 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 KIAA0895Q8NCT3 520 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 C18orf8Q96DM3 657 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 MS4A4AQ96JQ5 239 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 RTP3Q9BQQ7 232 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 NIF3L1Q9GZT8 377 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ZDHHC6Q9H6R6 413 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 GOLGA2P5Q9HBQ8 144 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SENP1Q9P0U3 644 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 CRLS1Q9UJA2 301 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 PARP4Q9UKK3 1724 aaKnown RBP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TRBV23OR9-2A0A075B6M9 112 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 MYADML2A6NDP7 307 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 NEMP2A6NFY4 417 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 RHPN2P1A8MT19 583 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SGK1O00141 431 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 PPP1R12AO14974 1030 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 PRPF4O43172 522 aaKnown RBP eCLIP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 EXTL3O43909 919 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ANXA6P08133 673 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 HOXB2P14652 356 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 NR1D1P20393 614 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 PSMD8P48556 350 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 POLE2P56282 527 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ZBTB16Q05516 673 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 MAP7D1Q3KQU3 841 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ITPRIPL2Q3MIP1 535 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 KRT71Q3SY84 523 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TFAP2DQ7Z6R9 452 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ECHDC2Q86YB7 292 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ARL14EPQ8N8R7 260 aaPredicted RBP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 HDAC11Q96DB2 347 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SMARCD1Q96GM5 515 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 C7orf25Q9BPX7 421 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 CATSPERBQ9H7T0 1116 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SLC40A1Q9NP59 571 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 TBC1D13Q9NVG8 400 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.79□□□□□ -1.32
NEDD9-202ENST00000379446 WDR35Q9P2L0 1181 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SLC39A10Q9ULF5 831 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 SYNPO2Q9UMS6 1093 aa6.79□□□□□ -1.32
NEDD9-202ENST00000379446 ZSCAN5CA6NGD5 496 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GOLGA8KD6RF30 607 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 SNAI1O95863 264 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PDHA1P08559 390 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 GRB10Q13322 594 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 RPS6KA2Q15349 733 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TMED2Q15363 201 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 EFHC1Q5JVL4 640 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 TAF8Q7Z7C8 310 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 C11orf96Q7Z7L8 435 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 PARP9Q8IXQ6 854 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 OR8D1Q8WZ84 308 aa6.78□□□□□ -1.32
NEDD9-202ENST00000379446 MIEF2Q96C03 454 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms