RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NEU2Q9Y3R4 380 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 MAGEB3O15480 346 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 PLA2G6O60733 806 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TRAF3Q13114 568 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 KCTD21Q4G0X4 260 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 C1orf189Q5VU69 101 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ERP27Q96DN0 273 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TMEM79Q9BSE2 394 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 CPA3P15088 417 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 PPM1AP35813 382 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 STAT5AP42229 794 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 STAT5BP51692 787 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 POTEGQ6S5H5 508 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TDRPQ86YL5 185 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RPRD1AQ96P16 312 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 IDI2Q9BXS1 227 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 MMP1P03956 469 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RPL4P36578 427 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 SLC11A2P49281 568 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 CLK3P49761 638 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 COPZ1P61923 177 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 CDKL1Q00532 357 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 PSMD5Q16401 504 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 DENND1BQ6P3S1 775 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 DHX40Q8IX18 779 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 EID3Q8N140 333 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 HAVCR1Q96D42 359 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 GOLPH3Q9H4A6 298 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 MCIDASD6RGH6 385 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RGS10O43665 173 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 UQCRBP14927 111 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF157P51786 506 aaPredicted RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 RAB25P57735 213 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 DSELQ8IZU8 1212 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 NSUN6Q8TEA1 469 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 FAM120BQ96EK7 910 aaKnown RBP13.66□□□□□ -0.22
HIPK3-202ENST00000379016 KCNN2Q9H2S1 579 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 COMMD8Q9NX08 183 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
HIPK3-202ENST00000379016 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 OASLQ15646 514 aaKnown RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 APOC1P02654 83 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 CKMP06732 381 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 MSL3P1P0C860 447 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 SLC2A4P14672 509 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ACOX1Q15067 660 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PUS7LQ9H0K6 701 aaKnown RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PSMC3IPQ9P2W1 217 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 UTYO14607 1347 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 STX11O75558 287 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF37AP17032 561 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 SERPINB9P50453 376 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 BNC1Q01954 994 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ATP6V1G3Q96LB4 118 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ELP3Q9H9T3 547 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 UBA2Q9UBT2 640 aaPredicted RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 A8MX80 341 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 NMT2O60551 498 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 CCNT2O60583 730 aaKnown RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 RB1P06400 928 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 AMD1P17707 334 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 GOLGA7BQ2TAP0 167 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PCDHB9Q9Y5E1 797 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 POTECB2RU33 542 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 GTPBP1O00178 669 aaKnown RBP13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PRKCBP05771 671 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 COPAP53621 1224 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
HIPK3-202ENST00000379016 PRPF3O43395 683 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TGM2P21980 687 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 STK4Q13043 487 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF613Q6PF04 617 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ARL10Q8N8L6 244 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 RIBC2Q9H4K1 309 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 TXNP10599 105 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 IFNGR2P38484 337 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 MAGEA2P43356 314 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ATG9AQ7Z3C6 839 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 AOX1Q06278 1338 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PITPNM2Q9BZ72 1349 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 BAIAP3O94812 1187 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 PLEKHA8P1O95397 391 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CYP4F2P78329 520 aa13.64□□□□□ -0.23
HIPK3-202ENST00000379016 EXOSC10Q01780 885 aaKnown RBP13.64□□□□□ -0.23
HIPK3-202ENST00000379016 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms