RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 CEP170P1Q96L14 293 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 SLITRK1Q96PX8 696 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 PRPF18Q99633 342 aaKnown RBP13.21□□□□□ -0.29
CHGB-201ENST00000378961 CCDC106Q9BWC9 280 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 MIS12Q9H081 205 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 CSADQ9Y600 493 aa13.21□□□□□ -0.29
CHGB-201ENST00000378961 CXorf49A8MYA2 514 aaPredicted RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 TRIM49D1C9J1S8 452 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 TM9SF1O15321 606 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 PSAPP07602 524 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 SETSIPP0DME0 302 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 BASP1P80723 227 aaKnown RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 MAMLD1Q13495 774 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 HNRNPDQ14103 355 aaKnown RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 C1orf228Q6PIY5 440 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 ANO5Q75V66 913 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 CPNE9Q8IYJ1 553 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 ATP6V0A1Q93050 837 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 NT5C1BQ96P26 610 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 JPH1Q9HDC5 661 aaPredicted RBP13.21□□□□□ -0.3
CHGB-201ENST00000378961 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.3
CHGB-201ENST00000378961 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 E2F8A0AVK6 867 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 PEX1O43933 1283 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 DKC1O60832 514 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHGB-201ENST00000378961 DHRS4L1P0CG22 281 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 VARSP26640 1264 aaKnown RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 ABCD1P33897 745 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ELK3P41970 407 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 PSMD7P51665 324 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 MYBPC2Q14324 1141 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 GRM2Q14416 872 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 MORF4L2Q15014 288 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 SNRNP35Q16560 246 aaKnown RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 KCTD21Q4G0X4 260 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ANKRD20A4Q4UJ75 823 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 TMCO4Q5TGY1 634 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 KLHL35Q6PF15 583 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 PPM1NQ8N819 430 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ATP11CQ8NB49 1132 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 TMIGD2Q96BF3 282 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 APOPT1Q96IL0 206 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ACSS3Q9H6R3 686 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 SLC9A2Q9UBY0 812 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 LOXHD1Q8IVV2 1947 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 KBTBD13C9JR72 458 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 RGS20O76081 388 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 OATP04181 439 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 KCNA2P16389 499 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 STT3AP46977 705 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 GTF2BQ00403 316 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 DMP1Q13316 513 aaPredicted RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 TREML2Q5T2D2 321 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 C6orf52Q5T4I8 152 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 GADL1Q6ZQY3 521 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 SV2AQ7L0J3 742 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 ZBTB46Q86UZ6 589 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 GALNT4Q8N4A0 578 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 IQCGQ9H095 443 aaKnown RBP13.2□□□□□ -0.3
CHGB-201ENST00000378961 PTTG2Q9NZH5 202 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 SNCAIPQ9Y6H5 919 aa13.2□□□□□ -0.3
CHGB-201ENST00000378961 TCRBV9S1A1TA0A576 114 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 COPEO14579 308 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 ITM2AO43736 263 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 RGS2P41220 211 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 OGDHQ02218 1023 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 FAXCQ5TGI0 409 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 AMIGO2Q86SJ2 522 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 SIKE1Q9BRV8 207 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 INIPQ9NRY2 104 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 RAB20Q9NX57 234 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 RNF181Q9P0P0 153 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 XPO7Q9UIA9 1087 aaKnown RBP13.19□□□□□ -0.3
CHGB-201ENST00000378961 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 COL11A1P12107 1806 aaPredicted RBP13.19□□□□□ -0.3
CHGB-201ENST00000378961 I3L4J1 428 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 PEX10O60683 326 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 STAM2O75886 525 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 MAP3K6O95382 1288 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 RPL22P35268 128 aaKnown RBP13.19□□□□□ -0.3
CHGB-201ENST00000378961 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
CHGB-201ENST00000378961 WNT7BP56706 349 aa13.19□□□□□ -0.3
CHGB-201ENST00000378961 MRPS5P82675 430 aaKnown RBP13.19□□□□□ -0.3
CHGB-201ENST00000378961 ZNF252P-AS1Q0IIN9 211 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms