RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PSMD7P51665 324 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 AQP4P55087 323 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ADARP55265 1226 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 HDAC4P56524 1084 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 EIF3EP60228 445 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 YWHAGP61981 247 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TUBA4AP68366 448 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PDE1BQ01064 536 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ROR1Q01973 937 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SLC25A11Q02978 314 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF252P-AS1Q0IIN9 211 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SURF1Q15526 300 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TRIP10Q15642 601 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 VPS72Q15906 364 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 FAM102BQ5T8I3 360 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CAPN12Q6ZSI9 719 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TMC7Q7Z402 723 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SATL1Q86VE3 508 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SLC26A7Q8TE54 656 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF606Q8WXB4 792 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 USP6NLQ92738 828 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 FAM118BQ9BPY3 351 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 INO80BQ9C086 356 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 USP29Q9HBJ7 922 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 STK39Q9UEW8 545 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CHMP2BQ9UQN3 213 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 POMPQ9Y244 141 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 AK5Q9Y6K8 562 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8QA0A0J9YX86 632 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8OA6NCC3 632 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GOLGA8NF8WBI6 632 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MAFGO15525 162 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CST8O60676 142 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CLASP2O75122 1294 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 DGAT1O75907 488 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 APOEP02649 317 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 FAM58BPP0C7Q3 252 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CPA2P48052 419 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ALDH18A1P54886 795 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 DPYSQ14117 519 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 HERC3Q15034 1050 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TKFCQ3LXA3 575 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 XKR9Q5GH70 373 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SLC39A4Q6P5W5 647 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 KLHDC10Q6PID8 442 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TMEM270Q6UE05 265 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 RBM44Q6ZP01 1051 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TICAM1Q8IUC6 712 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CERS5Q8N5B7 392 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TERB1Q8NA31 727 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SLC4A11Q8NBS3 891 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GSTCDQ8NEC7 633 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SREK1Q8WXA9 508 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MRRFQ96E11 262 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GPR101Q96P66 508 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZC3H12CQ9C0D7 883 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 KLC2Q9H0B6 622 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 FAM124BQ9H5Z6 455 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ETNK2Q9NVF9 386 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ARHGAP28Q9P2N2 729 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 LZTS1Q9Y250 596 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PCDHGA4Q9Y5G9 962 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 WDR81Q562E7 1941 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 A0A0J9YVX5 310 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 E5RJQ4 531 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MED7O43513 233 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CBFA2T3O75081 653 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ENDOD1O94919 500 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 RAG1P15918 1043 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TPSB2P20231 275 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 OSBPP22059 807 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 HARS2P49590 506 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 NUMBP49757 651 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PRKAA2P54646 552 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 NUP107P57740 925 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MRPS5P82675 430 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 DLG1Q12959 904 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TPSAB1Q15661 275 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 HP1BP3Q5SSJ5 553 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZSWIM2Q8NEG5 633 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PPP1R14CQ8TAE6 165 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 GSDMBQ8TAX9 411 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZNF516Q92618 1163 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 DCUN1D1Q96GG9 259 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MCEEQ96PE7 176 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 MFRPQ9BY79 579 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 PRDM16Q9HAZ2 1276 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TOPORSQ9NS56 1045 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 TUBA8Q9NY65 449 aaPredicted RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SLC9A2Q9UBY0 812 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 ZC3H7BQ9UGR2 993 aaKnown RBP8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SERPINA10Q9UK55 444 aa8.5□□□□□ -1.05
PTPRR-203ENST00000378778 SH3GLB1Q9Y371 365 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms