RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 LMNB2Q03252 620 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CALCOCO2Q13137 446 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 BFSP2Q13515 415 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ZNF365Q70YC5 407 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 RSPH1Q8WYR4 309 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ART4Q93070 314 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CHMP6Q96FZ7 201 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 RTP3Q9BQQ7 232 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 FAM129AQ9BZQ8 928 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSU72-204ENST00000378726 NEU2Q9Y3R4 380 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 TLDC2A0PJX2 215 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 M0QZQ0 153 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 AP1G2O75843 785 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ENDOD1O94919 500 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CYP11A1P05108 521 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ITGB1P05556 798 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CHN1P15882 459 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 TFE3P19532 575 aaPredicted RBP20.25■□□□□ 0.83
SSU72-204ENST00000378726 ITIH2P19823 946 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ADCY8P40145 1251 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 PTPN9P43378 593 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 NDUFV1P49821 464 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CLLU1OSQ5K130 101 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ZNF280BQ86YH2 543 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 CENPTQ96BT3 561 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 ACBD6Q9BR61 282 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 PAK6Q9NQU5 681 aaPredicted RBP20.25■□□□□ 0.83
SSU72-204ENST00000378726 KRT82Q9NSB4 513 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 HAUS2Q9NVX0 235 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 WHRNQ9P202 907 aa20.25■□□□□ 0.83
SSU72-204ENST00000378726 SAE1Q9UBE0 346 aaPredicted RBP20.25■□□□□ 0.83
SSU72-204ENST00000378726 MTRF1LQ9UGC7 380 aaKnown RBP20.25■□□□□ 0.83
SSU72-204ENST00000378726 DRG1Q9Y295 367 aaKnown RBP20.25■□□□□ 0.83
SSU72-204ENST00000378726 SMIM23A6NLE4 172 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 NBNO60934 754 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 DDHD2O94830 711 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 IVDP26440 423 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 SCTRP47872 440 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 HDAC4P56524 1084 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 MRPS5P82675 430 aaKnown RBP20.24■□□□□ 0.83
SSU72-204ENST00000378726 NOMO2Q5JPE7 1267 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 DENND2CQ68D51 928 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 BBS12Q6ZW61 710 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 RFX6Q8HWS3 928 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 KCNK16Q96T55 309 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 SELENOSQ9BQE4 189 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 DDX23Q9BUQ8 820 aaKnown RBP20.24■□□□□ 0.83
SSU72-204ENST00000378726 MAK16Q9BXY0 300 aaKnown RBP20.24■□□□□ 0.83
SSU72-204ENST00000378726 ADAM7Q9H2U9 754 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.24■□□□□ 0.83
SSU72-204ENST00000378726 DSEQ9UL01 958 aa20.24■□□□□ 0.83
SSU72-204ENST00000378726 F8W810 466 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 VPS41P49754 854 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 RABGGTBP53611 331 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 IFI35P80217 286 aaPredicted RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 ADCY1Q08828 1119 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SLC29A2Q14542 456 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 GPNMBQ14956 572 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 LACTB2Q53H82 288 aaPredicted RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 FAM35AQ86V20 835 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 GPATCH11Q8N954 259 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 DBF4BQ8NFT6 615 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SPATA18Q8TC71 538 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 CCT6BQ92526 530 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 CENPIQ92674 756 aaPredicted RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 FAM149B1Q96BN6 582 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SMOQ99835 787 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 C11orf84Q9BUA3 381 aaPredicted RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 BEGAINQ9BUH8 593 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 MMRN1Q13201 1228 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 MAP7D3Q8IWC1 876 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SIX6OS1Q8N1H7 587 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 CCDC89Q8N998 374 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 TTC13Q8NBP0 860 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 UHMK1Q8TAS1 419 aaKnown RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 URGCPQ8TCY9 931 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SNF8Q96H20 258 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 ZNF317Q96PQ6 595 aaPredicted RBP20.23■□□□□ 0.83
SSU72-204ENST00000378726 RNF208Q9H0X6 261 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 SEMA4AQ9H3S1 761 aa20.23■□□□□ 0.83
SSU72-204ENST00000378726 ENPP3O14638 875 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ARSEP51690 589 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 TKTL1P51854 596 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 VCPP55072 806 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 YWHAZP63104 245 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 SF3A3Q12874 501 aaKnown RBP eCLIP20.22■□□□□ 0.83
SSU72-204ENST00000378726 ZC3H12AQ5D1E8 599 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 PRUNE1Q86TP1 453 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 DEFB106AQ8N104 65 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ACTL9Q8TC94 416 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ATXN2LQ8WWM7 1075 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 PGM2Q96G03 612 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 SUSD3Q96L08 255 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 TBCBQ99426 244 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ADAM33Q9BZ11 813 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 GPATCH2LQ9NWQ4 482 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 KANSL3Q9P2N6 904 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 CHUKO15111 745 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 B4GALT3O60512 393 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms