RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 APOBEC3GQ9HC16 384 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC12A8A0AV02 714 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 H7C4K7 107 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 S100BP04271 92 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 POLBP06746 335 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC10A6Q3KNW5 377 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 PTPN20Q4JDL3 420 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 PPP1R26Q5T8A7 1209 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC25A41Q8N5S1 370 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 ATP6V0D2Q8N8Y2 350 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 ANKRD52Q8NB46 1076 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 FBXO36Q8NEA4 188 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 CEP41Q9BYV8 373 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SARS2Q9NP81 518 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 PCDHB5Q9Y5E4 795 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 CA12O43570 354 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 MYBL2P10244 700 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 NPR3P17342 541 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 FECHP22830 423 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 KDELR1P24390 212 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 MMEL1Q495T6 779 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 FAM183BPQ6ZVS7 135 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 TTC8Q8TAM2 541 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 ASIC4Q96FT7 647 aa14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 TRIM56Q9BRZ2 755 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-203ENST00000378679 MYO9BQ13459 2157 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 KCNK1O00180 336 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 TTC4O95801 387 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 LTFP02788 710 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 ZSCAN5DPP0CG00 497 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 ESRRAP11474 423 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 PPARGP37231 505 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 TAS2R40P59535 323 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 MRPL45Q9BRJ2 306 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 ELOVL4Q9GZR5 314 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 MUC3BQ9H195 1237 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 MINDY3Q9H8M7 445 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 RPS6KL1Q9Y6S9 549 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 SNRPAP09012 282 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 CCL23P55773 120 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 KCNA10Q16322 511 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC39A12Q504Y0 691 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 CELF6Q96J87 481 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 SERPINB12Q96P63 405 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 TMEM39AQ9NV64 488 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF143P52747 638 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 MROH9Q5TGP6 573 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 C9orf57Q5W0N0 161 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 NAPEPLDQ6IQ20 393 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 TMC3Q7Z5M5 1100 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 PPHLN1Q8NEY8 458 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 SGSM3Q96HU1 749 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 EPN3Q9H201 632 aa14.69□□□□□ -0.06
SHROOM1-203ENST00000378679 AP3B1O00203 1094 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CYBBP04839 570 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CCR1P32246 355 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 RAD51Q06609 339 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 RASIP1Q5U651 963 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 LRRC38Q5VT99 294 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 IFNL1Q8IU54 200 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 GBP7Q8N8V2 638 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 JOSD2Q8TAC2 188 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 NPLOC4Q8TAT6 608 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 AENQ8WTP8 325 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CPXM1Q96SM3 734 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC40A1Q9NP59 571 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 GDF3Q9NR23 364 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 C20orf96Q9NUD7 363 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PADI3Q9ULW8 664 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 MRPL42Q9Y6G3 142 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 ADAMTS7Q9UKP4 1686 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CHD4Q14839 1912 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TJP1Q07157 1748 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CLDN5O00501 218 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PSMD3O43242 534 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 URODP06132 367 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PECAM1P16284 738 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TAC1P20366 129 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 SLC11A2P49281 568 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 FASTKD1Q53R41 847 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TMEM192Q8IY95 271 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 EFHBQ8N7U6 833 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TSEN2Q8NCE0 465 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CD99L2Q8TCZ2 262 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 ZNF516Q92618 1163 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PPCSQ9HAB8 311 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CYP4F11Q9HBI6 524 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 POPDC2Q9HBU9 364 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PCMTD2Q9NV79 361 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 COG5Q9UP83 839 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 TMEM191CA6NGB0 347 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 RASSF10A6NK89 507 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 SEPT4O43236 478 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 DIAPH2O60879 1101 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 CKMP06732 381 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 FDFT1P37268 417 aa14.68□□□□□ -0.06
SHROOM1-203ENST00000378679 PTPRN2Q92932 1015 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms