RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 USP17L22D6RA61 530 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 USP17L19D6RCP7 530 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 USP17L20D6RJB6 530 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SPIRE1Q08AE8 756 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 USP17L24Q0WX57 530 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 CCNIQ14094 377 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 USP17L6PQ6QN14 398 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 ULK2Q8IYT8 1036 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PNMA8BQ9ULN7 279 aaPredicted RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PP2D1A8MPX8 630 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 TRAPPC3O43617 180 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 KRT36O76013 467 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SUPT7LO94864 414 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 RHOBTB3O94955 611 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 CCNG1P51959 295 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 KCTD10Q9H3F6 313 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SLC25A13Q9UJS0 675 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PPP2R3BQ9Y5P8 575 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SLC30A1Q9Y6M5 507 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 ALOX15P16050 662 aaPredicted RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PSMD4P55036 377 aaKnown RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PGS1Q32NB8 556 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SNRNP48Q6IEG0 339 aaKnown RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 ABRAXAS1Q6UWZ7 409 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 C8orf59Q8N0T1 100 aaPredicted RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PYDC1Q8WXC3 89 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 PAICSP22234 425 aaKnown RBP11.71□□□□□ -0.53
ITM2B-202ENST00000378565 LRPAP1P30533 357 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 SLC1A6P48664 564 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 EFNA5P52803 228 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 NCOA4Q13772 614 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 ZNF846Q147U1 533 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 HPS1Q92902 700 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 BORCS5Q969J3 196 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 BAIAP2Q9UQB8 552 aa11.71□□□□□ -0.53
ITM2B-202ENST00000378565 ATP7BP35670 1465 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ITSN1Q15811 1721 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 GRM4Q14833 912 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ZFP69Q49AA0 526 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 PERM1Q5SV97 790 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 PFDN2Q9UHV9 154 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.54
ITM2B-202ENST00000378565 SAGE2PA6NJ88 616 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ATP6V1C1P21283 382 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ME2P23368 584 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.54
ITM2B-202ENST00000378565 PSMC5P62195 406 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.54
ITM2B-202ENST00000378565 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 EEPD1Q7L9B9 569 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.54
ITM2B-202ENST00000378565 RNASE11Q8TAA1 199 aaKnown RBP11.71□□□□□ -0.54
ITM2B-202ENST00000378565 POLIQ9UNA4 740 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 SNAP91O60641 907 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 BGNP21810 368 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 NRF1Q16656 503 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 TUBA3EQ6PEY2 450 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 TBC1D10CQ8IV04 446 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 POC5Q8NA72 575 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 ZNF671Q8TAW3 534 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 NSMCE2Q96MF7 247 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 CACNA1CQ13936 2221 aa11.71□□□□□ -0.54
ITM2B-202ENST00000378565 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 FBXO36Q8NEA4 188 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 C8orf4Q9NR00 106 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 CLIC5Q9NZA1 410 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 EMC3Q9P0I2 261 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 MSH3P20585 1137 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 IL12AP29459 219 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 RP1P56715 2156 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 MCAMP43121 646 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TRAP1Q12931 704 aaKnown RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 STRBPQ96SI9 672 aaKnown RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TMEM165Q9HC07 324 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TMEM138Q9NPI0 162 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TMCO1Q9UM00 188 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 DMTF1Q9Y222 760 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TTLL9Q3SXZ7 439 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 ERICH5Q6P6B1 374 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 HAUS6Q7Z4H7 955 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 USP13Q92995 863 aaPredicted RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 OSBPL6Q9BZF3 934 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 EPB41L4BQ9H329 900 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 ELOVL6Q9H5J4 265 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 RBP1P09455 135 aa11.7□□□□□ -0.54
ITM2B-202ENST00000378565 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
ITM2B-202ENST00000378565 TYSND1Q2T9J0 566 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms