RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ZNF512Q96ME7 567 aaPredicted RBP16.51■□□□□ 0.23
CCDC107-204ENST00000378409 CFAP57Q96MR6 1250 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 SLC2A13Q96QE2 648 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 WDR24Q96S15 920 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 CDCA3Q99618 268 aaPredicted RBP16.51■□□□□ 0.23
CCDC107-204ENST00000378409 CNPY3Q9BT09 278 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 NSUN3Q9H649 340 aaKnown RBP16.51■□□□□ 0.23
CCDC107-204ENST00000378409 IGFLR1Q9H665 355 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 NMUR1Q9HB89 426 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 ABCC13Q9NSE7 274 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 NAALADL1Q9UQQ1 740 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 USTQ9Y2C2 406 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 HYOU1Q9Y4L1 999 aa16.51■□□□□ 0.23
CCDC107-204ENST00000378409 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
CCDC107-204ENST00000378409 SOX1O00570 391 aaPredicted RBP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 DPYSL4O14531 572 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 SPOPO43791 374 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 FYNP06241 537 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 DESP17661 470 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 MAN1A1P33908 653 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 NOS2P35228 1153 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 ATP11AP98196 1134 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 C15orf59Q2T9L4 293 aaPredicted RBP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 CCDC14Q49A88 953 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 ZNF697Q5TEC3 545 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 SYPL2Q5VXT5 272 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 SYT10Q6XYQ8 523 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 PEX26Q7Z412 305 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 SLFN11Q7Z7L1 901 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 CPNE8Q86YQ8 564 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 MYRFLQ96LU7 910 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 DDX23Q9BUQ8 820 aaKnown RBP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 UXTQ9UBK9 157 aaPredicted RBP16.5■□□□□ 0.23
CCDC107-204ENST00000378409 STAP1Q9ULZ2 295 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 ALG6Q9Y672 507 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 NOTCH4Q99466 2003 aa16.5■□□□□ 0.23
CCDC107-204ENST00000378409 KIF2AO00139 706 aaPredicted RBP16.49■□□□□ 0.23
CCDC107-204ENST00000378409 TNNT1P13805 278 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 COMTP21964 271 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 HOXA9P31269 272 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
CCDC107-204ENST00000378409 PTPN9P43378 593 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 PSEN1P49768 467 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 SULT1E1P49888 294 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 GRIN2CQ14957 1233 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 TCEAL5Q5H9L2 206 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 DAB2IPQ5VWQ8 1189 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 NIPA2Q8N8Q9 360 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 PDZD8Q8NEN9 1154 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 VN1R2Q8NFZ6 395 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 RNF139Q8WU17 664 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 OVCA2Q8WZ82 227 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 TBCBQ99426 244 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 CORO1BQ9BR76 489 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 ZNF334Q9HCZ1 680 aaPredicted RBP16.49■□□□□ 0.23
CCDC107-204ENST00000378409 OSER1Q9NX31 292 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 TRPM5Q9NZQ8 1165 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 DNAI1Q9UI46 699 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 AMFRQ9UKV5 643 aa16.49■□□□□ 0.23
CCDC107-204ENST00000378409 SYNJ2BP-COX16A0A087WUM0 186 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 NCK2O43639 380 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 RNF8O76064 485 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 HNRNPA1P09651 372 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 ZDHHC11BP0C7U3 371 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 RALAP11233 206 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 TFE3P19532 575 aaPredicted RBP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 SLC1A1P43005 524 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 PITX1P78337 314 aaPredicted RBP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 HYAL1Q12794 435 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 SLC25A52Q3SY17 297 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 SH3PXD2AQ5TCZ1 1133 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 BEND5Q7L4P6 421 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 NT5DC3Q86UY8 548 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 FAM172AQ8WUF8 416 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 ZDHHC7Q9NXF8 308 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 RRN3Q9NYV6 651 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 CLIC5Q9NZA1 410 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 COX16Q9P0S2 106 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 PACSIN2Q9UNF0 486 aaPredicted RBP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
CCDC107-204ENST00000378409 HELZP42694 1942 aaKnown RBP16.48■□□□□ 0.23
CCDC107-204ENST00000378409 M0QYT0 321 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 ENC1O14682 589 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 XYLBO75191 536 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 TUBB4AP04350 444 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 RARGP13631 454 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 PTPN2P17706 415 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 CASQ1P31415 396 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 ACAP1Q15027 740 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 RAB6CQ53S08 254 aa16.47■□□□□ 0.23
CCDC107-204ENST00000378409 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
CCDC107-204ENST00000378409 TMC8Q8IU68 726 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms