RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 SMYD3Q9H7B4 428 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 PDLIM7Q9NR12 457 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 CXorf49A8MYA2 514 aaPredicted RBP16.65■□□□□ 0.26
C19orf54-201ENST00000378313 ICAM1P05362 532 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 MYL4P12829 197 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 YWHAZP63104 245 aaKnown RBP16.65■□□□□ 0.26
C19orf54-201ENST00000378313 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 RALGPS1Q5JS13 557 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 KLC3Q6P597 504 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 FBXL19Q6PCT2 694 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 MCF2L2Q86YR7 1114 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 PIWIL2Q8TC59 973 aaKnown RBP16.65■□□□□ 0.26
C19orf54-201ENST00000378313 ZFRQ96KR1 1074 aaKnown RBP16.65■□□□□ 0.26
C19orf54-201ENST00000378313 PCDHGC3Q9UN70 934 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 APOBEC2Q9Y235 224 aaKnown RBP16.65■□□□□ 0.26
C19orf54-201ENST00000378313 ZNF541Q9H0D2 1346 aa16.65■□□□□ 0.26
C19orf54-201ENST00000378313 FAM189A1O60320 539 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 FDFT1P37268 417 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 SOX10P56693 466 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 HPCAP84074 193 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 ROR1Q01973 937 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 NCOA4Q13772 614 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 SMTNL2Q2TAL5 461 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 WDTC1Q8N5D0 677 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 CMASQ8NFW8 434 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 Q9H521 79 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 NRDE2Q9H7Z3 1164 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 POPDC2Q9HBU9 364 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 CCPG1Q9ULG6 757 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 POMPQ9Y244 141 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 RAG1P15918 1043 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 HSP90AA5PQ58FG0 334 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 ANKRD23Q86SG2 305 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 KBTBD6Q86V97 674 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 ZNF526Q8TF50 670 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 KCNN1Q92952 543 aa16.64■□□□□ 0.25
C19orf54-201ENST00000378313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 RBAKQ9NYW8 714 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 ZC3H7BQ9UGR2 993 aaKnown RBP16.64■□□□□ 0.25
C19orf54-201ENST00000378313 H3BNX3 289 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 HNRNPRO43390 633 aaKnown RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 TFAP2AP05549 437 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 ACAT1P24752 427 aaKnown RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 RFC1P35251 1148 aaPredicted RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 ACOT2P49753 483 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 EPHB1P54762 984 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 KCNT1Q5JUK3 1230 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 SMYD5Q6GMV2 418 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 TIFABQ6ZNK6 161 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 RBM44Q6ZP01 1051 aaKnown RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 SPATA18Q8TC71 538 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 FAF2Q96CS3 445 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 CMTM5Q96DZ9 223 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 AGBL1Q96MI9 1066 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 CATSPER2Q96P56 530 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 MRPS26Q9BYN8 205 aaKnown RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 TIMMDC1Q9NPL8 285 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 C6orf203Q9P0P8 240 aaPredicted RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 DTNAQ9Y4J8 743 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 TXNDC9O14530 226 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 PFDN1O60925 122 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 SIN3BO75182 1162 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 DGAT1O75907 488 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 CLPTM1O96005 669 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 LDHAP00338 332 aaKnown RBP16.63■□□□□ 0.25
C19orf54-201ENST00000378313 SERPINB6P35237 376 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 SERPINB9P50453 376 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 GPAT2Q6NUI2 795 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 NDUFAF2Q8N183 169 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 FBXW8Q8N3Y1 598 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 KCTD6Q8NC69 237 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 PPP1R14BQ96C90 147 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 LRRC39Q96DD0 335 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 USP29Q9HBJ7 922 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 DNAJC28Q9NX36 388 aa16.63■□□□□ 0.25
C19orf54-201ENST00000378313 NFIBO00712 420 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 AVILO75366 819 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 PGM3O95394 542 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 APOEP02649 317 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 PROCP04070 461 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 CD48P09326 243 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 KRT3P12035 628 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 PTGER2P43116 358 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 CNTN2Q02246 1040 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 NOMO1Q15155 1222 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 DARS2Q6PI48 645 aaKnown RBP16.62■□□□□ 0.25
C19orf54-201ENST00000378313 C1orf228Q6PIY5 440 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 MAML3Q96JK9 1138 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 APOL6Q9BWW8 343 aa16.62■□□□□ 0.25
C19orf54-201ENST00000378313 RBM38Q9H0Z9 239 aaKnown RBP16.62■□□□□ 0.25
C19orf54-201ENST00000378313 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms