RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 RALAP11233 206 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 CD72P21854 359 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 SOX5P35711 763 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 SOX9P48436 509 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 FANCCQ00597 558 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 FILIP1LQ4L180 1135 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 C10orf120Q5SQS8 335 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 NOP9Q86U38 636 aaKnown RBP21.54■■□□□ 1.04
TRIM13-203ENST00000378183 NACA2Q9H009 215 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 MIS12Q9H081 205 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 TSPY26PQ9H489 355 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 ST7Q9NRC1 585 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 DUS2Q9NX74 493 aaKnown RBP21.54■■□□□ 1.04
TRIM13-203ENST00000378183 TJP2Q9UDY2 1190 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 PIAS3Q9Y6X2 628 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 MIA3Q5JRA6 1907 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 ZNF318Q5VUA4 2279 aa21.54■■□□□ 1.04
TRIM13-203ENST00000378183 SCAMP3O14828 347 aaKnown RBP21.53■■□□□ 1.04
TRIM13-203ENST00000378183 GREM1O60565 184 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 SERPINC1P01008 464 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 KRT9P35527 623 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 MLLT6P55198 1093 aaPredicted RBP21.53■■□□□ 1.04
TRIM13-203ENST00000378183 TPM4P67936 248 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 PDCLQ13371 301 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 RUNX3Q13761 415 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 PDGFRLQ15198 375 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 EML3Q32P44 896 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 BSPRYQ5W0U4 402 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 ASTLQ6HA08 431 aaPredicted RBP21.53■■□□□ 1.04
TRIM13-203ENST00000378183 TMEM110Q86TL2 294 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 DDX42Q86XP3 938 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRIM13-203ENST00000378183 SCUBE3Q8IX30 993 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 TMEM105Q8N8V8 129 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 IRGQQ8WZA9 623 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 SHDQ96IW2 340 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 FOXQ1Q9C009 403 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 DNMT3LQ9UJW3 386 aa21.53■■□□□ 1.04
TRIM13-203ENST00000378183 MTF2Q9Y483 593 aaPredicted RBP21.53■■□□□ 1.04
TRIM13-203ENST00000378183 MYOFQ9NZM1 2061 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 ZDBF2Q9HCK1 2354 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 KANSL1LA0AUZ9 987 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 E5RJQ4 531 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 GOLGA6L19H0YKK7 550 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 FBXO21O94952 628 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 STAT1P42224 750 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 ACADSBP45954 432 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 CLCN5P51795 746 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 ITPRIPL2Q3MIP1 535 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 TAF3Q5VWG9 929 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 BTBD8Q5XKL5 378 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 SUGP1Q8IWZ8 645 aaKnown RBP21.52■■□□□ 1.04
TRIM13-203ENST00000378183 KIAA1958Q8N8K9 716 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 C1orf131Q8NDD1 294 aaKnown RBP21.52■■□□□ 1.04
TRIM13-203ENST00000378183 EPS8L1Q8TE68 723 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 EDEM1Q92611 657 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 CHFRQ96EP1 664 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 SPAG5Q96R06 1193 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 CPXM1Q96SM3 734 aa21.52■■□□□ 1.04
TRIM13-203ENST00000378183 NOCTQ9UK39 431 aaKnown RBP21.52■■□□□ 1.04
TRIM13-203ENST00000378183 A0A1W2PQC6 194 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 E2F8A0AVK6 867 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 STK25O00506 426 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 PAPSS1O43252 624 aaPredicted RBP21.51■■□□□ 1.03
TRIM13-203ENST00000378183 IRF1P10914 325 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 GLULP15104 373 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 AOC1P19801 751 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 AVPR2P30518 371 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 IFNAR2P48551 515 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 KPNA1P52294 538 aaPredicted RBP21.51■■□□□ 1.03
TRIM13-203ENST00000378183 EFEMP1Q12805 493 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 TADA2BQ86TJ2 420 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 ZNF687Q8N1G0 1237 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 SLC20A1Q8WUM9 679 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 CDK5RAP1Q96SZ6 601 aaKnown RBP21.51■■□□□ 1.03
TRIM13-203ENST00000378183 LTB4R2Q9NPC1 389 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 RASAL2Q9UJF2 1139 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 F5P12259 2224 aa21.51■■□□□ 1.03
TRIM13-203ENST00000378183 SPECC1L-ADORA2AF8WAN1 911 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 FYNP06241 537 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 MMEP08473 750 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 CHRNB2P17787 502 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 CTHP32929 405 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 CDH5P33151 784 aaPredicted RBP21.5■■□□□ 1.03
TRIM13-203ENST00000378183 ZNF445P59923 1031 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 TXNDC11Q6PKC3 985 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 ZNF852Q6ZMS4 543 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 MIB1Q86YT6 1006 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 ADGRG2Q8IZP9 1017 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 PJA1Q8NG27 643 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 BAP1Q92560 729 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 PPP1R13BQ96KQ4 1090 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 C8orf33Q9H7E9 229 aaPredicted RBP21.5■■□□□ 1.03
TRIM13-203ENST00000378183 ECT2Q9H8V3 914 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 ABCC13Q9NSE7 274 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 SH3BP1Q9Y3L3 701 aa21.5■■□□□ 1.03
TRIM13-203ENST00000378183 MAN2B1O00754 1011 aa21.49■■□□□ 1.03
TRIM13-203ENST00000378183 LTFP02788 710 aa21.49■■□□□ 1.03
TRIM13-203ENST00000378183 TARSP26639 723 aaKnown RBP21.49■■□□□ 1.03
TRIM13-203ENST00000378183 PBX1P40424 430 aa21.49■■□□□ 1.03
TRIM13-203ENST00000378183 UBASH3AP57075 661 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms