RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SHCBP1Q8NEM2 672 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 LRRC8CQ8TDW0 803 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 WNT8BQ93098 351 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 WDCPQ9H6R7 721 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 HOMER3Q9NSC5 361 aa8.43□□□□□ -1.06
CKAP2-203ENST00000378037 ZC3H7BQ9UGR2 993 aaKnown RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 EP300Q09472 2414 aaPredicted RBP8.43□□□□□ -1.06
CKAP2-203ENST00000378037 KNTC1P50748 2209 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 NEMP1O14524 444 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 PRRG1O14668 218 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 DNAJC6O75061 913 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 VDRP11473 427 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 GJA1P17302 382 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 SYN1P17600 705 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ASPAP45381 313 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 VCPP55072 806 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 PPP2R2AP63151 447 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 B3GNT9Q6UX72 402 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 C16orf59Q7L2K0 433 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 TMC3Q7Z5M5 1100 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 TTC30AQ86WT1 665 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 VPS52Q8N1B4 723 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 CCNYL1Q8N7R7 359 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 FSD1LQ9BXM9 530 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 NIFKQ9BYG3 293 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 DCLK3Q9C098 648 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 PCDHA3Q9Y5H8 950 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 CACNA1GO43497 2377 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 MCF2P10911 925 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 MMP8P22894 467 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ELK3P41970 407 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 YWHAHQ04917 246 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ACTN3Q08043 901 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 PIGHQ14442 188 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 SOWAHAQ2M3V2 549 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 CCDC185Q8N715 623 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 GPATCH11Q8N954 259 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 B3GALNT2Q8NCR0 500 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ACTRT1Q8TDG2 376 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 NTPCRQ9BSD7 190 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 MTG1Q9BT17 334 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 SYNPO2Q9UMS6 1093 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 NUP205Q92621 2012 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 TCRBV7S3A2A0A539 114 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 PRR23AA6NEV1 266 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 KIAA0391O15091 583 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 TOP3BO95985 862 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 MUTP22033 750 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 SLC26A2P50443 739 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ARL4CP56559 192 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 LILRA4P59901 499 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 TUBB4BP68371 445 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 NOL9Q5SY16 702 aaKnown RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 C9orf57Q5W0N0 161 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 HIBCHQ6NVY1 386 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 THEM5Q8N1Q8 247 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 HVCN1Q96D96 273 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 FAM81BQ96LP2 452 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 FGD4Q96M96 766 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 RPRD1AQ96P16 312 aaPredicted RBP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 KLHL5Q96PQ7 755 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 CCT8L2Q96SF2 557 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 KATNAL1Q9BW62 490 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 SLCO1B3Q9NPD5 702 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 ETNK2Q9NVF9 386 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 MIOSQ9NXC5 875 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.42□□□□□ -1.06
CKAP2-203ENST00000378037 STAP1Q9ULZ2 295 aa8.42□□□□□ -1.06
CKAP2-203ENST00000378037 UBA6A0AVT1 1052 aaPredicted RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 STBD1O95210 358 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 PTPN1P18031 435 aaKnown RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 MCL1Q07820 350 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 PKN2Q16513 984 aaKnown RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 ZNF792Q3KQV3 632 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 WDR93Q6P2C0 686 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 PRSS55Q6UWB4 352 aaPredicted RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TRIM72Q6ZMU5 477 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 MICALCLQ6ZW33 695 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 CCDC91Q7Z6B0 441 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 FAM228AQ86W67 206 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 RCOR2Q8IZ40 523 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TTC8Q8TAM2 541 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 AENQ8WTP8 325 aaKnown RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 MAIP1Q8WWC4 291 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 EXOC4Q96A65 974 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 ZNF669Q96BR6 464 aaPredicted RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TSNARE1Q96NA8 513 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 FAM111AQ96PZ2 611 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TGS1Q96RS0 853 aaKnown RBP8.41□□□□□ -1.06
CKAP2-203ENST00000378037 APBA2Q99767 749 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 PITPNM3Q9BZ71 974 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 KLC2Q9H0B6 622 aa8.41□□□□□ -1.06
CKAP2-203ENST00000378037 TKTL2Q9H0I9 626 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms