RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 NDRG1Q92597 394 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 CYLDQ9NQC7 956 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 C2orf42Q9NWW7 574 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 KIAA1257Q9ULG3 409 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
SMARCE1-203ENST00000377808 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 RNF225M0QZC1 329 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 O00370 1275 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 ATG13O75143 517 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 ZBED1O96006 694 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 OPRD1P41143 372 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 SLC6A11P48066 632 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 FNTBP49356 437 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 YWHAGP61981 247 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 GAD2Q05329 585 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 DMWDQ09019 674 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 FBXO43Q4G163 708 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 GJB7Q6PEY0 223 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 RHBDF2Q6PJF5 856 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 PRR23BQ6ZRT6 265 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 TPGS1Q6ZTW0 290 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 ADGRG2Q8IZP9 1017 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 KIAA1958Q8N8K9 716 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 NAT16Q8N8M0 369 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 TFAP2BQ92481 460 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 WBP2Q969T9 261 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 OTUB2Q96DC9 234 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 KREMEN1Q96MU8 473 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 MED15Q96RN5 788 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 FAM126AQ9BYI3 521 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 UBXN6Q9BZV1 441 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 SEMA4AQ9H3S1 761 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 THAP9Q9H5L6 903 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 POLR3BQ9NW08 1133 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 STRIP2Q9ULQ0 834 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 USP3Q9Y6I4 520 aa12.15□□□□□ -0.46
SMARCE1-203ENST00000377808 SLC12A8A0AV02 714 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 APODP05090 189 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 SLC9A1P19634 815 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 PLA2G4AP47712 749 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 PXNP49023 591 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 MFAP3P55082 362 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 APBA1Q02410 837 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 STILQ15468 1287 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 LPAL2Q16609 132 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 C2orf27AQ580R0 203 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 RAB41Q5JT25 222 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 TRIM65Q6PJ69 517 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 C12orf40Q86WS4 652 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 BHMTQ93088 406 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 HHIPQ96QV1 700 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 ARHGEF4Q9NR80 690 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 SPHK2Q9NRA0 654 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 CLIC5Q9NZA1 410 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 RAB23Q9ULC3 237 aa12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
SMARCE1-203ENST00000377808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 NEDD8-MDP1E9PL57 170 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 K7ESF4 209 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 THAP12O43422 761 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 TDGF1P13385 188 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 ERCC5P28715 1186 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 GNA15P30679 374 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 HOXC13P31276 330 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 CNGA2Q16280 664 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 ZBTB44Q8NCP5 570 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 CCDC26Q8TAB7 109 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 EDEM1Q92611 657 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 ACDQ96AP0 544 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 PNKPQ96T60 521 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 ST7Q9NRC1 585 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 MARCH2Q9P0N8 246 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 SMG5Q9UPR3 1016 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
SMARCE1-203ENST00000377808 TBC1D3BA6NDS4 549 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 MED7O43513 233 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 STC2O76061 302 aa12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 LETM1O95202 739 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-203ENST00000377808 KAT7O95251 611 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms