RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 VAMP7P51809 220 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 IRX4P78413 519 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 PNOCQ13519 176 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 MAP7D1Q3KQU3 841 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 HECTD3Q5T447 861 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 SPOPLQ6IQ16 392 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 BBS7Q8IWZ6 715 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 FAM186BQ8IYM0 893 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 OTUB2Q96DC9 234 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 EEF2KMTQ96G04 330 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 SMOQ99835 787 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.84
CBWD3-204ENST00000377349 HMGXB4Q9UGU5 601 aa20.27■□□□□ 0.84
CBWD3-204ENST00000377349 PTGER3P43115 390 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 DHPSP49366 369 aaPredicted RBP20.27■□□□□ 0.83
CBWD3-204ENST00000377349 ACOT1Q86TX2 421 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 TTC30AQ86WT1 665 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 WHAMMQ8TF30 809 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 TMEM174Q8WUU8 243 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 SMARCD1Q96GM5 515 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 IMPG2Q9BZV3 1241 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 KRT82Q9NSB4 513 aa20.27■□□□□ 0.83
CBWD3-204ENST00000377349 KNL1Q8NG31 2342 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TRIM24O15164 1050 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TULP3O75386 442 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 HLA-DRAP01903 254 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 RPL13P26373 211 aaKnown RBP20.26■□□□□ 0.83
CBWD3-204ENST00000377349 GCLMP48507 274 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 GAD2Q05329 585 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 SGSM1Q2NKQ1 1148 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 EOGTQ5NDL2 527 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 SH3PXD2AQ5TCZ1 1133 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 SV2AQ7L0J3 742 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TMEM25Q86YD3 366 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 NAT16Q8N8M0 369 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TMC2Q8TDI7 906 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 PIGKQ92643 395 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TNIP3Q96KP6 325 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 CSNK1G1Q9HCP0 422 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TMEM9BQ9NQ34 198 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TMEM74BQ9NUR3 256 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 EVLQ9UI08 416 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-204ENST00000377349 TRAF3IP3Q9Y228 551 aa20.26■□□□□ 0.83
CBWD3-204ENST00000377349 PKD1L2Q7Z442 2459 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 AP1G2O75843 785 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 ALDH1A2O94788 518 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 CCDC130P13994 396 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 NUCB2P80303 420 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 ADAM9Q13443 819 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 ZACNQ401N2 412 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 DAB2IPQ5VWQ8 1189 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 MIB1Q86YT6 1006 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 TMEFF1Q8IYR6 380 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
CBWD3-204ENST00000377349 HMGB4Q8WW32 186 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 ERCC4Q92889 916 aaPredicted RBP20.25■□□□□ 0.83
CBWD3-204ENST00000377349 JAKMIP2Q96AA8 810 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 POLMQ9NP87 494 aaPredicted RBP20.25■□□□□ 0.83
CBWD3-204ENST00000377349 SPHK2Q9NRA0 654 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 FAM49BQ9NUQ9 324 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 COMMD8Q9NX08 183 aa20.25■□□□□ 0.83
CBWD3-204ENST00000377349 CKAP5Q14008 2032 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 CD58P19256 250 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 PSMC2P35998 433 aaKnown RBP20.24■□□□□ 0.83
CBWD3-204ENST00000377349 ASPAP45381 313 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 NDST1P52848 882 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 C1orf220Q5T0J3 134 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 INTS8Q75QN2 995 aaKnown RBP20.24■□□□□ 0.83
CBWD3-204ENST00000377349 LPCAT2Q7L5N7 544 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 GPRIN1Q7Z2K8 1008 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 CRYBG2Q8N1P7 616 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 TERB1Q8NA31 727 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 CD248Q9HCU0 757 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 OSER1Q9NX31 292 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 SH3BP1Q9Y3L3 701 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 FREM2Q5SZK8 3169 aa20.24■□□□□ 0.83
CBWD3-204ENST00000377349 TCRBV21S2A2A0A5A6 115 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 TRIM21P19474 475 aaKnown RBP20.23■□□□□ 0.83
CBWD3-204ENST00000377349 CSRP1P21291 193 aaKnown RBP20.23■□□□□ 0.83
CBWD3-204ENST00000377349 ADORA2BP29275 332 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 ZNF252P-AS1Q0IIN9 211 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 PEAR1Q5VY43 1037 aaPredicted RBP20.23■□□□□ 0.83
CBWD3-204ENST00000377349 ARMCX6Q7L4S7 300 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 C12orf29Q8N999 325 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 CCDC150Q8NCX0 1101 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 SLC2A14Q8TDB8 520 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 KLF16Q9BXK1 252 aaPredicted RBP20.23■□□□□ 0.83
CBWD3-204ENST00000377349 TMEM121BQ9BXQ6 578 aaPredicted RBP20.23■□□□□ 0.83
CBWD3-204ENST00000377349 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
CBWD3-204ENST00000377349 TBC1D3BA6NDS4 549 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 HHLA1C9JL84 531 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 IKBKBO14920 756 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TLR5O60602 858 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TBX18O95935 607 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 ASS1P00966 412 aaKnown RBP20.22■□□□□ 0.83
CBWD3-204ENST00000377349 IRF1P10914 325 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 GABRG2P18507 467 aa20.22■□□□□ 0.83
CBWD3-204ENST00000377349 TRIM61Q5EBN2 209 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms